Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0733 ATGTCCCTGCCCAAGCCATATACTCAAATCGCTAGAAATGTCACTTGCGATTGCAATTTCCAAAACGGCACCGTTTGTCATGTCATCAACATTGTGTTGAAAGGCTTGAATCTGTCTGGAGTTGTCCCCAGTGAATTCGGAGATCTCCCCCAGCTTACTGTGCTCAGTGATCTCACTCGCAACTATTTCAATGGCTCCATCCCAACGTTTTTTACTCGTATACCCATTACCAATTTGTCCCTTTTGGGGAATAGACTCAGGGGTTCAATTCCTACAGAATTGGGGGAAATTGCTACTCTGCAGGAGCTGAACCTAGAAGATAATCAGCTTGGAGGACATCTTCCTCATAGTCTTGGAAATTTGAGAAACTTACGAAGACTACTTCTTTCGTCAAATAATTTTACCGGGACAATACCAGAAACATTTGGAAATCTCAAAAACCTTACTGATTTGTCCTTGTTATTTACTGCGATCACTCCTGACAATCTTTGTAGTAGGATAGATGGAAGCAACTTATCAGGGAAGATACCAAGTTTTATTGGGAATTGGACCAACATGACGGTTTTGAGAATATCTGACTTGAGTGGAACAACAACCATGGCATTTCCTAATCTAAAGGATTTGGAGAATATTCAAAGGCTGATACTCAGAAATTGCTTAATCACTGGTCCCATTCCAGATGATGACTTTAGCAAAATGACAAATTTAAAGACTCTAGACCTGAGCTTTAACAAGTTGGATGGTCCTATCCCTGATTCATTTAGGAAGTTGACGGGGTTAAATCACATGTTTTTGACGAACAATTTTCTGAATGGAACAATTCCAGAATGGATGCTTGACAGCAAGCAAAAATTTGACTTATCTTACAATAATTTTAGTGAGGCTTCTGCATCTAGCTGCCAGCTCTTACAAGTGAATTTGGTTTCTAGTCTTTCATCTTCAGCAAGCAATCCACTCCCATGTTTGAAGAAGGGCCTACCTTGTGAGGGAAAACCAAACCTTGGTACGCGCGTATTCGATGTTTCAATTCAAGGTGTTAAATACTTGAAAGATTTTAACATTGCGGAGAAAGCAGGTGGAATTGGCAAGGGCATCACAATGGAATATGACGTTGATGTGAATGATAGCACCTTAGAGATCCATTTATATTGGGCAGGCAAAGGAACTACTGGAATTCCCACTAGAGGCGTATATGGACCTCTAATATCTGCTATCACTGTAACCCCAAATTTCACAGTTGGGTTGTCAGTTGGAGCTATCATTGGAATTGTGGTTGCCTCGTGTGTATTTCTCATACTGGTCCTCATTGTCCTCCGAAAGAAGGGTTTCCTTGGTGGGAAAGATCCTAAAGACAGAGATTTGAAGGGCTTGGAACTTAAAACTGGTATATTTACCTTCAGGGAAATCAAAGCAGCAACCAACAACTTTAATGCTGATAATAAGATCGGAGAAGGAGGGTTTGGTCCTGTTTACAAGGGCATTCTATCAGATGGCACAATAATTGCAATTAAGCAGCTATCTGCTAAATCAAGGCAGGGGAACCGTGAATTCATAAATGAAATAGGAATCATCTCTCCTTTGCAACACCCTTGTCTTGTTAAGATTTATGGCTGTTGTGTTGAAGGAGATGAGTTGCTGCTAATATATGAGTTTATGGATAACAATAGCCTTGCTCGTGCTTTATTTGGCCCGGAAGAATTCCAGTTAAAATTGGATTGGCCAACAAGACAAAAGATTTGTGTAGGTATTGCTAGAGGTTTGGCTTACCTTCATGAAGAATCGAGATTGAAAATAGTTCATAGAGACATCAAGGCCACTAATGTGTTGCTTGATAAAGATCTCAACCCTAAGATATCTGATTTTGGTTTGGCAAAGCTTGTTGAAGAGGATAATACACATATAAGCACTCGAATTGCTGGCACTTACGGATATATGGCGCCTGAATATGCAATGCATGGTTATTTAACTGACAAAGCGGATGTCTATAGTTTTGGAATTGTTATCTTGGAAATTGTTAGTGGGAGGAGCAACACGATTTACCGGACAAAGGACGAAGCATTCTATCTTCTTGACTGGGCACGGCTTTTGAAAGAAAAAGGAGAATTAATGGAGCTAGTTGATCCAAGGTTGGGCTCAGAATTTGACAAAGAGGAAGTAATGTTGATGATAAAAGTGGCTCTAATATGCACCCATGTGACCCCAGCGTTTAGGCCTGCCATGTCTTCAGTGGTAGGCATTCTTGAAGGCAAAAGTGTGTTAGAGGAGACAGTTTCAGAGTCAAGTGAGGTATTGGATGAGAAGAAGTTGGAGACAATGAGGATGTTATACAGACAGAGGGAAGAAGATAAGATAGCGGGGATTCAACAACAAAGCACATCAGCAACATCTACATCAGATCTCTATCCTCGGCGTTTGGATTCCTCTTCTTACTGA 2433 0.4069 MSLPKPYTQIARNVTCDCNFQNGTVCHVINIVLKGLNLSGVVPSEFGDLPQLTVLSDLTRNYFNGSIPTFFTRIPITNLSLLGNRLRGSIPTELGEIATLQELNLEDNQLGGHLPHSLGNLRNLRRLLLSSNNFTGTIPETFGNLKNLTDLSLLFTAITPDNLCSRIDGSNLSGKIPSFIGNWTNMTVLRISDLSGTTTMAFPNLKDLENIQRLILRNCLITGPIPDDDFSKMTNLKTLDLSFNKLDGPIPDSFRKLTGLNHMFLTNNFLNGTIPEWMLDSKQKFDLSYNNFSEASASSCQLLQVNLVSSLSSSASNPLPCLKKGLPCEGKPNLGTRVFDVSIQGVKYLKDFNIAEKAGGIGKGITMEYDVDVNDSTLEIHLYWAGKGTTGIPTRGVYGPLISAITVTPNFTVGLSVGAIIGIVVASCVFLILVLIVLRKKGFLGGKDPKDRDLKGLELKTGIFTFREIKAATNNFNADNKIGEGGFGPVYKGILSDGTIIAIKQLSAKSRQGNREFINEIGIISPLQHPCLVKIYGCCVEGDELLLIYEFMDNNSLARALFGPEEFQLKLDWPTRQKICVGIARGLAYLHEESRLKIVHRDIKATNVLLDKDLNPKISDFGLAKLVEEDNTHISTRIAGTYGYMAPEYAMHGYLTDKADVYSFGIVILEIVSGRSNTIYRTKDEAFYLLDWARLLKEKGELMELVDPRLGSEFDKEEVMLMIKVALICTHVTPAFRPAMSSVVGILEGKSVLEETVSESSEVLDEKKLETMRMLYRQREEDKIAGIQQQSTSATSTSDLYPRRLDSSSY 810
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0733 810 Pfam Leucine Rich Repeat 100 121 IPR001611 GO:0005515
Lele12g0733 810 Pfam Leucine Rich Repeat 123 145 IPR001611 GO:0005515
Lele12g0733 810 FunFam Leucine-rich repeat receptor protein kinase EMS1 74 161 - -
Lele12g0733 810 SUPERFAMILY Protein kinase-like (PK-like) 460 745 IPR011009 -
Lele12g0733 810 Gene3D Ribonuclease Inhibitor 5 98 IPR032675 -
Lele12g0733 810 Gene3D Ribonuclease Inhibitor 99 166 IPR032675 -
Lele12g0733 810 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 333 775 - -
Lele12g0733 810 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 202 295 - -
Lele12g0733 810 MobiDBLite consensus disorder prediction 785 810 - -
Lele12g0733 810 Pfam Malectin domain 333 405 IPR021720 -
Lele12g0733 810 Pfam Protein kinase domain 477 678 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0733 810 SUPERFAMILY L domain-like 20 308 - -
Lele12g0733 810 CDD STKc_IRAK 482 749 - -
Lele12g0733 810 Gene3D - 319 410 - -
Lele12g0733 810 Gene3D Ribonuclease Inhibitor 167 318 IPR032675 -
Lele12g0733 810 ProSitePatterns Serine/Threonine protein kinases active-site signature. 598 610 IPR008271 GO:0004672|GO:0006468
Lele12g0733 810 ProSiteProfiles Protein kinase domain profile. 476 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0733 810 SMART serkin_6 476 746 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0733 810 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 446 551 - -
Lele12g0733 810 Pfam Leucine rich repeat 210 268 IPR001611 GO:0005515
Lele12g0733 810 Gene3D Transferase(Phosphotransferase) domain 1 552 764 - -
Lele12g0733 810 FunFam Putative LRR receptor-like serine/threonine-protein kinase 552 759 - -
Lele12g0733 810 Gene3D Phosphorylase Kinase; domain 1 447 551 - -
Lele12g0733 810 MobiDBLite consensus disorder prediction 783 810 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0733 Lele-ChrLele12 15472741 15482185 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0733 13 750 Receptor kinase-like Gene Family AT1G53440 44.128 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele12g0733 Pkinase 2.5e-47 CL0016