Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0732 ATGGAGTTTGCCATTTCAAGCTCCAAACTTTTCACTCTATTCTTCTTCGGATTTCTTCTGCTATGTTTCTTCTCAGATTTTCCATCAAATGCTCAACTTATACCCCAACAAGAAGTGAAAGCTTTACAGGCAATATCTGATAAGCTCACAAACGTGAAGTGGAAGGTGACAACATCATCTTGTATTAATGGAGAAGGATTTAATAACCTCTTTACTTCTTCATCCTCTGGAGTAACCAGGAATGTCACTTGCAATTGCAATTTCCAAAACGGCACCGTTTGCCATGTCACTAATATTCTGTTGAAAAGCCAAAATATAGCAGGAGAAATACCCAATGAATTTGGAAATCTCACCCATTTGACTGAACTGGATCTTTATTTCAACTATCTCAATGGCACAATTCCAACGTCCTTTAGGCACATCCCTCTTGTCACTCTGTCCCTTGTGGGGAATCGCATTAGTGGTTCAATTCCTGAAGAATGGGGTGAAATTGCTAGTCTGATGGATTTGGTCCTTGAAGATAATCAGCTTGGAGGACCTCTTGCTCATAGTCTTGGAAATTTGGAAAACTTGCGGAGAATACGTCTTTCTGCAAATAATATTACTGGAACAATACCAGAAACGTATGGAAATCTGAAGAACATGATTGATTTTTCTATAGATGGGAGTAACTTATCAGGAAAGATACCAAGTTTTATTGGAAACTGGACCAAAATTCAATATATGGATATGGAGGGCACAGGCATGGAAGGCCCGATTCCATCAACCATATCGTTGTTAACAAATTTGATAGAATTGAGAATATCCGACTTGAAAGGAACAACAACTATGACATTTCCTAATCTGAAGAATTTGACGAGTTTGCAACGACTGATATTAAGGAATTGCTTAATAACTGGTCCCATTCCACCGTATTTTGGTGAAATGAAAAACTTAAAGACCTTGGACCTGAGCTTTAACCTGCTGACTGGTTCAATCCCTATCTCATTTCAGAACTTGTTGAGTTTTAATCACATTGATTTATCTTACAACAATTTTACTGAGGTTGCTACATCTGATTGCCAGATCTTACAAGTGAACTTGGCTTCCAGCCTTTCGCCTTCAGTAAGAAATGCATCCTTTTGTCTGAAGAGGGGCCTGCCCTGTCCAGGAAATCCTCAGTGTGAGTTGAGACTTTGTGCATCGATCATATACTTGAAGGATTTTAACATTGCAAAGGAAGCAGGTGGAGTTGGTAAGGGCATCACTAGGGAATTTGATGTTGATGTGAATGATAGCACTTTGGAGATACATTTATATTGGGCAGGGAAAGGTACTACTACAATTCCCAATAGAGGTGTATATGGACCTCTAATATCTGCCATTACTGTGACCCCTAATTTCAAAGTTCCTTCAAAAGGTTTATCTGTTGGAGCTATTGTTGGAATTGTTGTTGGATCGTGCGTCTTCCTTGTACTTGTACTCATTGTCCTCAGAAAGAAGGGTTTCCTTGGTGGGAAAGATCCAAAAGACCAAGAACTTTTAGATCTGAAGACAGGAGAAGGTGGCTTTGGGCCTGTGTATAAGGGTGTGTTGTCTGATGGTGTCGTCATTGCGATTAAGCAGCTATCTTCCAAGTCAAAGCAAGGAAATCGTGAATTTGTTAATGAAATAGGAATGATTTCTGCTTTGCAACATCCAAATCTTGTGAAGCTTTACGGTTGTTGCATCGAAGGAAATCAATTGTTGCTTGTATATGAATACTTGGAGAACAACAATCTTGCTCGAGCACTTTTTGGCAGTGATGAACAAAGGATACACTTGGACTGGCCCACAAGAGCCTATGTTCTCCAAGAGCAAGGGAAGCTTCTAGAATTGATGGATCCGCGTCTCGGTTCAAGCTACTCCAAAGAAGAGGCCATGAGAATGCTAAATTTGGCTCTTTTGTGCACTAGTCTATCTCCCACTCTCAGGCCCTGCATGTCATCTGTAATGAGCATGCTTGAGGGAAAAACTCCAATCCAAGCACCAATTATAAACAAGAACAAAGATCAAGATGCAAGGTTCAAAGCCTTTGAGATGCTGTCATATGATAGCCAGACATCTGTAAGTATGGAACAAAGAGGCAAGTCAACGGATGTGTCATGGGTTGACTCCTCAATATCTGTTCCGAGTAAGGATTATTTTTCTTCATCTAGTAAGCTTCTTGAAGATTGA 2196 0.4003 MEFAISSSKLFTLFFFGFLLLCFFSDFPSNAQLIPQQEVKALQAISDKLTNVKWKVTTSSCINGEGFNNLFTSSSSGVTRNVTCNCNFQNGTVCHVTNILLKSQNIAGEIPNEFGNLTHLTELDLYFNYLNGTIPTSFRHIPLVTLSLVGNRISGSIPEEWGEIASLMDLVLEDNQLGGPLAHSLGNLENLRRIRLSANNITGTIPETYGNLKNMIDFSIDGSNLSGKIPSFIGNWTKIQYMDMEGTGMEGPIPSTISLLTNLIELRISDLKGTTTMTFPNLKNLTSLQRLILRNCLITGPIPPYFGEMKNLKTLDLSFNLLTGSIPISFQNLLSFNHIDLSYNNFTEVATSDCQILQVNLASSLSPSVRNASFCLKRGLPCPGNPQCELRLCASIIYLKDFNIAKEAGGVGKGITREFDVDVNDSTLEIHLYWAGKGTTTIPNRGVYGPLISAITVTPNFKVPSKGLSVGAIVGIVVGSCVFLVLVLIVLRKKGFLGGKDPKDQELLDLKTGEGGFGPVYKGVLSDGVVIAIKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIEGNQLLLVYEYLENNNLARALFGSDEQRIHLDWPTRAYVLQEQGKLLELMDPRLGSSYSKEEAMRMLNLALLCTSLSPTLRPCMSSVMSMLEGKTPIQAPIINKNKDQDARFKAFEMLSYDSQTSVSMEQRGKSTDVSWVDSSISVPSKDYFSSSSKLLED 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0732 731 Pfam Malectin domain 398 455 IPR021720 -
Lele12g0732 731 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 608 691 - -
Lele12g0732 731 Pfam Protein tyrosine and serine/threonine kinase 511 602 IPR001245 GO:0004672|GO:0006468
Lele12g0732 731 Pfam Leucine rich repeat 287 346 IPR001611 GO:0005515
Lele12g0732 731 SUPERFAMILY L domain-like 81 346 - -
Lele12g0732 731 Gene3D - 394 460 - -
Lele12g0732 731 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 205 272 - -
Lele12g0732 731 Gene3D Transferase(Phosphotransferase) domain 1 580 679 - -
Lele12g0732 731 SMART LRR_typ_2 188 211 IPR003591 -
Lele12g0732 731 SMART LRR_typ_2 117 140 IPR003591 -
Lele12g0732 731 SMART LRR_typ_2 309 332 IPR003591 -
Lele12g0732 731 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 38 204 - -
Lele12g0732 731 ProSiteProfiles Protein kinase domain profile. 506 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0732 731 Gene3D Ribonuclease Inhibitor 44 382 IPR032675 -
Lele12g0732 731 SUPERFAMILY Protein kinase-like (PK-like) 513 664 IPR011009 -
Lele12g0732 731 Gene3D Phosphorylase Kinase; domain 1 512 579 - -
Lele12g0732 731 FunFam Os04g0616200 protein 521 582 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0732 Lele-ChrLele12 15454654 15461345 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0732 601 720 Receptor kinase-like Gene Family AT1G53440 59.231 3.57e-35 141
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele12g0732 PK_Tyr_Ser-Thr 2.2e-15 CL0016