Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0731 ATGCCATGTTGTGTACAACCTTATAAAAAGGGCATAAAAAAGTCATTTAATCCTGTGAGTTCTCTTTCTAATCAGTCCATTCTTAAAAAAAAAAACCTTGTTCTCCTTGCCTCCAATAAATCATACCCAATTCTACATTTCCCTCTGCCCTTTGTCTTGTTTGTCATTCTTTTCCTTCAGTCTCGACCCCTCTTCTTCAAAACCAACCTCCCTGGTCTGCTAATGAAGTTTGCCATGTCAAGTTCCAAACTTCTCTCTGTTTTTTTCTTCGGATTTCTGCTTCTCTGTTTCTTCTCAGTTTCTCCTTCAAACGCTCAACTTATACCCCTGGACGAAGTGAATGCTCTACAGGCAATATCTGATAAACTTACAAATGTGAATTGGAAGGTGACGCAAACATCTTGTAGAACAGGGGATGGATTTAATATCCTGACTGAATCTTCTGAAGTAACCAGGAATGTCACTTGCAATTGCACCCTCCAAAACGGCAACGTTTGCCATGTCACTCATATTCTGTTGAAAAGCCTGAACATAGCAGGAGAAATACCCAGTGAATTTGGGAATCTTACACAATTGATTGAACTTGATCTCAGTCGCAACTATCTCAGTGGCACAATCCCAACAGTTTTTACGCGAATCCCTCTTGTCATTCTGTCCCTTTTGGGGAATCGCATTAATGGTTCGATTCCTGCAGAATTGGGTGAAATTGCTACTCTGCAGGAGCTTGTTTTAGAAAATAATCAGCTTGAAGGACATCTTCCTCAGAGTCTTGGAAATTTAAGCAACCTTCGGAGATTACTTCTTTCTGCAAATAATTTTACCGGGACAATACCAGAAACGTTTGGAAATCTAAAGAACCTAACTGATTTTAGGATAGATGGAAGCAGTTTATCAGGGAAGATACCCAGTTTTATTGGGAACTGGACCAAAATTAGTATTCTGAATATGCAGGGCACAGGCATGGAAGGTCCAATTCCTCCCACCATATCCTTGTTTACAAATTTGACAGAATTGAGAATATCGGACTTGAGTGGAACAACAACCATGACATTTCCTGATCTCAAGGATTTGAAGATTTTAAAGCTACTGATATTGAGAAATTGCCTAATTGTTGGTCCTATTCCAAATGACTTCAAGGAAATGACGGAATTAAAGACTCTAGACCTGAGCTTTAACAGGTTGAATGGTTCAGTCCCTGTTTCGTTTGAGTACTTGAAATTTAATTACATGTTTCTGACGAACAATTCTCTGAGCGGATTAATTCCAGAGTGGATGACAGTGAACAAACAAAATATTGATTTATCTTACAACAATTTTACTGAGGCTTCTGCAACTACTTGCCAGCAGTTGAAAGTGAACTTGGCTTCTAGTCTCTCATCTTCTGCGAGCAATTCACTCATGTGTTTGAAGAAGGGCCTACCTTGTGTGGGCAAACCAAAATATTATTCGTTGTTCATAAACTGTGGAGGAGGCCATATGGAGTTTGACGGTCATGAATATGAGCAAGATTTATCTCGAGATGGCATTTCATACTTTAATCTTCAAAACAACTGGGCTTATAGCAGCACAGGCGTATATATGGGAAATGATAATGCTGATTTTGTAGCAACAAGTTCATCTCCGTTGAATGTCAGTAGCCCAGAATACTACCAAACAGCGCGCCTTAGCCCTCTATCACTTAAGTACTATGGCCTATGTATGATGAAGGGCAATTATAAAGTAAAGCTCCATTTTGCTGAGATAATGTTTTCTGATGACCAGACTTATAGCAGCCTTGGTAGACGCATATTTGATGTTTCAATTCAAGGTGTTAAATACTTGAAAGATTTGAACATTGCGGAGAAAGCAGGTGGAGTTGGCAAGGGCATCACAATGGAATCTGATGTTGACGTGAATGATAGCACCTTGGAGATCCATTTGTACTGGGCGGGGAAAGGAACTACCGCGATTCCCAATAGAGGTGTATATGGACCTCTAATATCTGCTATCACTGTGACCCCAAACTTCAAAGTTCCTTCAAAAGGGTTGTCCACTGGAGCTATTGTTGGAATTGTGGTTGGATCATGTGTTTTCCTTGTATTGGTACTCATTGTCCTCCGAAAGAAGGGTTTCCTTGGTGGGAAAGATCCACAAGACAGAGAACTTCTAGATCTTAAGACAGGTTATTTTTCTCTAAGACAAATTAAAACAGCCACCAACAACTTTGACCCAGCAAATAAGATAGGAGAAGGAGGATTTGGGCCTGTGTTTAAGGGTGTGCTGTCAGATGGTGTGGTTATTGCGGTTAAGCAGCTCTCATCCAAGTCGAAGCAAGGGAATCGTGAATTTGTTAATGAGATAGGAATGATCTCTGCACTGCAACATCCGAATCTTGTGAAGCTTTATGGTTGTTGCATAGATGGAAATCAACTAATGCTTATATATGAATACATGGAGAATAATAGTCTTGCCCGAGCACTTTTTGGCCATGAAGAACAGAGGATACATTTGGATTGGCCCACAAGATTGAAGATTTGTCAGGGGATAGCAAGGGGGTTAGCTTATCTTCACGAGGAGTCAAGATTGAAAATAGTACATAGGGACATTAAGGCAACAAACGTCTTACTTGATAAGCATCTAAATGCCAAAATTTCAGACTTTGGTCTAGCGAAGCTTGATGAAGAAGAGAACACGCATATCAGCACCCGAATAGCTGGAACAATTGGTTACATGGCCCCTGAATATGCAATGAGAGGTTATTTGACAGATAAAGCAGATATTTATAGCTTTGGAGTTGTTGCTTTGGAGATTGTTAGTGGAAAGAGCAACACGAATTACCGGCCAAAGGATGAGTTTGTTTATCTTCTTGATTGGGCCTATGTTCTCCAAGAGCAAGGAAATCTTCTGGAACTAGTTGATCCGTATCTTGGTTCAAGCTACTCCCAAGATGAGGCCATGAGAATGCTCAACTTGGCTCTTCTGTGCACCAACCCATCTCCCACCCTCAGACCAGCCATGTCATCTGTAGTGAGCATGCTTGAAGGAAATATTCCAATCCAAGCTCCAATAATCCGGCGCAAAGATGCAAGCCAGGATGCAAGGTTCAAAGCCTTTGAGATGCTATCACATGACAGCCAAACGTCTATAGCCTCTCAAACAAGCATGGAGCAAAGAGGCAAGTCAATGGATGGGCCATGGATTGACTCCTCAATATCTCTTCCAAGTGGAGATGATTATTCTTCATCTAGGAAGCTTCTTTGA 3240 0.4083 MPCCVQPYKKGIKKSFNPVSSLSNQSILKKKNLVLLASNKSYPILHFPLPFVLFVILFLQSRPLFFKTNLPGLLMKFAMSSSKLLSVFFFGFLLLCFFSVSPSNAQLIPLDEVNALQAISDKLTNVNWKVTQTSCRTGDGFNILTESSEVTRNVTCNCTLQNGNVCHVTHILLKSLNIAGEIPSEFGNLTQLIELDLSRNYLSGTIPTVFTRIPLVILSLLGNRINGSIPAELGEIATLQELVLENNQLEGHLPQSLGNLSNLRRLLLSANNFTGTIPETFGNLKNLTDFRIDGSSLSGKIPSFIGNWTKISILNMQGTGMEGPIPPTISLFTNLTELRISDLSGTTTMTFPDLKDLKILKLLILRNCLIVGPIPNDFKEMTELKTLDLSFNRLNGSVPVSFEYLKFNYMFLTNNSLSGLIPEWMTVNKQNIDLSYNNFTEASATTCQQLKVNLASSLSSSASNSLMCLKKGLPCVGKPKYYSLFINCGGGHMEFDGHEYEQDLSRDGISYFNLQNNWAYSSTGVYMGNDNADFVATSSSPLNVSSPEYYQTARLSPLSLKYYGLCMMKGNYKVKLHFAEIMFSDDQTYSSLGRRIFDVSIQGVKYLKDLNIAEKAGGVGKGITMESDVDVNDSTLEIHLYWAGKGTTAIPNRGVYGPLISAITVTPNFKVPSKGLSTGAIVGIVVGSCVFLVLVLIVLRKKGFLGGKDPQDRELLDLKTGYFSLRQIKTATNNFDPANKIGEGGFGPVFKGVLSDGVVIAVKQLSSKSKQGNREFVNEIGMISALQHPNLVKLYGCCIDGNQLMLIYEYMENNSLARALFGHEEQRIHLDWPTRLKICQGIARGLAYLHEESRLKIVHRDIKATNVLLDKHLNAKISDFGLAKLDEEENTHISTRIAGTIGYMAPEYAMRGYLTDKADIYSFGVVALEIVSGKSNTNYRPKDEFVYLLDWAYVLQEQGNLLELVDPYLGSSYSQDEAMRMLNLALLCTNPSPTLRPAMSSVVSMLEGNIPIQAPIIRRKDASQDARFKAFEMLSHDSQTSIASQTSMEQRGKSMDGPWIDSSISLPSGDDYSSSRKLL 1079
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0731 1079 SUPERFAMILY L domain-like 164 440 - -
Lele12g0731 1079 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN DDB_G0281931-RELATED 92 1043 - -
Lele12g0731 1079 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g53440 112 276 - -
Lele12g0731 1079 Gene3D Ribonuclease Inhibitor 345 456 IPR032675 -
Lele12g0731 1079 Gene3D Ribonuclease Inhibitor 111 275 IPR032675 -
Lele12g0731 1079 Gene3D Phosphorylase Kinase; domain 1 707 810 - -
Lele12g0731 1079 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 707 810 - -
Lele12g0731 1079 Gene3D - 481 668 - -
Lele12g0731 1079 CDD STKc_IRAK 741 1008 - -
Lele12g0731 1079 Gene3D Transferase(Phosphotransferase) domain 1 811 1014 - -
Lele12g0731 1079 FunFam Putative LRR receptor-like serine/threonine-protein kinase isoform A 277 344 - -
Lele12g0731 1079 Pfam Protein tyrosine and serine/threonine kinase 739 1004 IPR001245 GO:0004672|GO:0006468
Lele12g0731 1079 Pfam Malectin domain 483 663 IPR021720 -
Lele12g0731 1079 Gene3D Ribonuclease Inhibitor 276 344 IPR032675 -
Lele12g0731 1079 SUPERFAMILY Protein kinase-like (PK-like) 720 1023 IPR011009 -
Lele12g0731 1079 ProSiteProfiles Protein kinase domain profile. 735 1017 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0731 1079 FunFam Putative leucine-rich repeat receptor-like serine/threonine-protein kinase 481 668 - -
Lele12g0731 1079 MobiDBLite consensus disorder prediction 1039 1079 - -
Lele12g0731 1079 SMART LRR_typ_2 260 283 IPR003591 -
Lele12g0731 1079 SMART LRR_typ_2 189 212 IPR003591 -
Lele12g0731 1079 SMART LRR_typ_2 381 404 IPR003591 -
Lele12g0731 1079 ProSitePatterns Serine/Threonine protein kinases active-site signature. 857 869 IPR008271 GO:0004672|GO:0006468
Lele12g0731 1079 SMART serkin_6 735 1004 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0731 1079 FunFam Putative LRR receptor-like serine/threonine-protein kinase 811 1018 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0731 Lele-ChrLele12 15434150 15446058 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0731 88 1070 Receptor kinase-like Gene Family AT1G53440 63.257 0.0 1254
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele12g0731 PK_Tyr_Ser-Thr 1.7e-49 CL0016