Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0728 ATGGCCGCGAAGATTTTCGCTGGTCTCAGAACGTATGGCAACTACAAGCTCCCTAAGCACTGCGACAACAATGAGGTGCTCAAGGCTCTCTGCAACGAGGCTGGCTGGACTGTTGAACCCGACGGCACCACTTACCGCAAGTTCGTCGCTGTGCTTGTTGCAACATGGCAGAAGCTTTTACAGACATCGCATGGACGTATGGATGTGGTTGGTGGTTCTGCAGCAGCGAGCCCATGCTCATCTTACCATCCAAGTCCCTGTGCTTCCTACAACCCAAGCCCTGGCTCTTCTTCCTTCCCAAGCCCACGCTCATCGGCCTATGCAGCAAATCCTAATGGCGATGGCAATTCCCTAATTCCATGGCTAAAAACTCTCTCATCTGGATCATCTTCAGCATCCTCTTCAAAGCTCCCCCATCTCTACATTCATAGTGGCTCCATCAGTGCTCCTGTCACTCCTCCTCTGAGCTCTCCAACTGCACGAATACCCCGAACCAAAGGTGAATGGGATGATCAGTCCACTCGTCCTGGGTGGATTGGGCAGCAGTATTCCTTCCTGCCCTCCTCAACTCCTCCAAGCCCTGGTCGCGAGGTTGATAACCCAGAATCGTTTGCTGGTATTAGGGTTCCCCAGGGTGGGCCAAACTCTCCAACCTTCAGTTTGGTCTCTTCAAACCCCTTTGGCTTCAAAGAAGATGTTCTAGCTAGCAGCGGTTCGCGAATGTGGACTCCTGGGCAAAGTGGGACATGTTCTCCAGCCATAGCAGCAGGCTCTGATCACACTGCTGACATTCCCATGGCTGAAGTGGTTTCAGAAGAATTTGCCTTTGGGAGTAACACAACAGGCTTTGTGAAGCCATGGGAAGGAGAGATGATCCATGAAGATAGCGGATCAGATGACCTTGAACTCACTCTTGGGACCTCAAAAACCAGTTAG 936 0.5182 MAAKIFAGLRTYGNYKLPKHCDNNEVLKALCNEAGWTVEPDGTTYRKFVAVLVATWQKLLQTSHGRMDVVGGSAAASPCSSYHPSPCASYNPSPGSSSFPSPRSSAYAANPNGDGNSLIPWLKTLSSGSSSASSSKLPHLYIHSGSISAPVTPPLSSPTARIPRTKGEWDDQSTRPGWIGQQYSFLPSSTPPSPGREVDNPESFAGIRVPQGGPNSPTFSLVSSNPFGFKEDVLASSGSRMWTPGQSGTCSPAIAAGSDHTADIPMAEVVSEEFAFGSNTTGFVKPWEGEMIHEDSGSDDLELTLGTSKTS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0728 311 MobiDBLite consensus disorder prediction 292 311 - -
Lele12g0728 311 PANTHER BES1/BZR1 HOMOLOG PROTEIN 3-RELATED 2 310 IPR033264 GO:0003700|GO:0006351|GO:0009742
Lele12g0728 311 MobiDBLite consensus disorder prediction 91 111 - -
Lele12g0728 311 MobiDBLite consensus disorder prediction 152 178 - -
Lele12g0728 311 Pfam BES1/BZR1 plant transcription factor, N-terminal 2 126 IPR008540 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0728 Lele-ChrLele12 15410568 15414132 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0728 6 310 BZR Transcription Factor Family AT1G78700 64.331 1.52e-121 350
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF BES1 Lele12g0728 BES1_N 1e-43 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele11g0608 11 5959836 5963769 Lele12g0728 12 15410568 15414132 ECH
Lele12g0728 12 15410568 15414132 Lele12g0728 12 15410568 15414132 ECH
Lele09g0598 09 4567958 4572364 Lele12g0728 12 15410568 15414132 hybridization
Lele10g0546 10 4006906 4010645 Lele12g0728 12 15410568 15414132 hybridization