Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0714 ATGAGCCTCATGCATGCGAGTGTCAACCACACAGCCCCAATGAGCAGTTTCAGCTTCGCCGGCTTCTACGAATCATGGTTCGATCACCTTCACCACCTCCTTCACCAGCTCTCCGCCGCCACGCGACCACCCAGCACACCGGAGGAAAACCACAAGCTCCTCATCCTCATCGACAAGGTGATGGCCCACTACGATGATTACTATCGCACCAAGTCCGTCGCCTCCCAGAACGATCCCCTGCAAATGCTCGTCTCCCCCTGGGCCACCACCCTTGAACGCTCCCTTCACTGGATCGCCGGCTGGCGCCCCACCATCGCCTTCCACCTCGTCTATACCGAGTCCTCTGTCCTCTTCGAGTCCCATATCATTGACATCCTCCGTGGGGTTCGTACCGGCGACCTCGGCGATCTCTCCCCCTCTCAGTTTCGGCGAGTCAGCCAGTTGCAATGTGACACCGTGAAGGAAGAGAATGCGATAACGGAGGAGCTATCGGAGTGGCAAGACAGCGGGAGCGAACTGATAGAAGGGGCGGCGGAGATAGAGGAGAAGATGGAGGCTCTAGGGAGAATCATAAGGAAGGCGGACGATCTCCGGCTGAGAACCCTCAAGAGCGTGGTGGGTCTCCTCACTCCACAGCAAGCCGTCGACTTCTTGATCGCCTCTGCCGAGTTGCTCTCCGGCATCCGCTCTTGGGGAATCAATCACGACCGTCGACGATCCAGATAA 726 0.5813 MSLMHASVNHTAPMSSFSFAGFYESWFDHLHHLLHQLSAATRPPSTPEENHKLLILIDKVMAHYDDYYRTKSVASQNDPLQMLVSPWATTLERSLHWIAGWRPTIAFHLVYTESSVLFESHIIDILRGVRTGDLGDLSPSQFRRVSQLQCDTVKEENAITEELSEWQDSGSELIEGAAEIEEKMEALGRIIRKADDLRLRTLKSVVGLLTPQQAVDFLIASAELLSGIRSWGINHDRRRSR 241
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0714 241 PANTHER DOG1 DOMAIN-CONTAINING PROTEIN 18 240 - -
Lele12g0714 241 Coils Coil 177 197 - -
Lele12g0714 241 Pfam Seed dormancy control 34 112 IPR025422 GO:0006351|GO:0043565
Lele12g0714 241 ProSiteProfiles DOG1 domain profile. 16 238 IPR025422 GO:0006351|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0714 Lele-ChrLele12 15314567 15315385 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0714 11 220 bZIP Transcription Factor Family AT5G06960 25.991 1.31e-17 78.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0714 12 15314567 15315385 Lele12g0714 12 15314567 15315385 ECH
Lele10g0559 10 4084080 4084901 Lele12g0714 12 15314567 15315385 hybridization