Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0702 ATGGCCTTGCGTCACTCCCTTCTAAAACTCCCGTCGCCCCCTTCTATTTCTAACTTCACTCCCAAACCCACCGTTCTTAAAAAACGCTCACTCTCTGTCTCAGCCTCTGCAACAGCCATGGCTTCCACTGCTCGAAAGGTTCTGGTTCCGATTGCGAATGGCACTGAGCCTATGGAGGCTGTGATTACGATCGATGTTCTCCGACGATCGGGAGCTGACGTTACTGTTGCTTCTGCTGGGAAACAGCTTTGGGTCGAAGCTCTACATGGCGTCAAGATTATTGCTGATGCTCCTGTTTCTGATGTTGCTGATACTGCTTTCGACCTTGTCGCTTTACCTGGAGGTGTTCCAGGTGTGGATAATCTCAGAGACTGTGAAACTTTGGAAAGCTTAGTGAAAAAGCACGTTGCAGATGGACGGCTTTATGCTGCAGTATGCGCTGCTCCTGCTGTGGTACTTGGAGCATGGGGCTTGCTCAAGGGACTGAAGGCAACTGGCCATCCATCATTTATGGAAAAACTTGCCTCTCATGCGACTGCTGTGGAATCAATAGTGCAGCTGGATGGAAGAGTAGTGACAAGCCGTGCACCAGGCACTACCATGGACTTTGGCGTGGCACTGGTTGAGCAGTTATATGGAAAGGAGAAGGCCAACGAAGTTGCTGGTCCACTGGTCATGCGATCCAATCATGGGGAGGAATACACTTTTACTGAGCTAAACCCAGTCCAATGGACATGTGATAATCCCCCCAAGATTCTTGTACCAATTGCTAATGGCACTGAGGAAATGGAAGCTGTTATTATCATTGATGTTCTACGAAGAGCAAAAGCAAATGTTGTAGTTGCTTCTGTTGAGGATAAAGTAGAGATTGTAGCTTCTCGGAAAGTTAAACTGGAGGCAGATATGCTCCTTGATGAGGCAGCTAAACTTACATATGACCTAATTGTGCTGCCAGGTGGACTTGGTGGTGCCCAAGCTTTTGCAAATTCAGAAACTCTGGTCAGTTTGCTGAAAAAGCAGAGAGAATCAAACAGATATTATGGAGCGATTTGTGCATCCCCAGCATTAGTCTTGGAGCCCCATGGCTTGGTAAAGGGTAAGAAGGCCACTGCCTTTCCTGCTATGTGCAGCAAGCTATCAGATCAAAGCGAAATTGAAAACAGGGTCGTGGTTGACGGCAACCTTATTACCAGCAGAGGACCAGGGACCTCCATGGAGTTTGCATTTACTATTGTGGAAAAGCTATTTGGGCGGCAGTTAGGACTTGAACTTGCAAAAGCGATGGTCTTCACACGCGCATAG 1302 0.4777 MALRHSLLKLPSPPSISNFTPKPTVLKKRSLSVSASATAMASTARKVLVPIANGTEPMEAVITIDVLRRSGADVTVASAGKQLWVEALHGVKIIADAPVSDVADTAFDLVALPGGVPGVDNLRDCETLESLVKKHVADGRLYAAVCAAPAVVLGAWGLLKGLKATGHPSFMEKLASHATAVESIVQLDGRVVTSRAPGTTMDFGVALVEQLYGKEKANEVAGPLVMRSNHGEEYTFTELNPVQWTCDNPPKILVPIANGTEEMEAVIIIDVLRRAKANVVVASVEDKVEIVASRKVKLEADMLLDEAAKLTYDLIVLPGGLGGAQAFANSETLVSLLKKQRESNRYYGAICASPALVLEPHGLVKGKKATAFPAMCSKLSDQSEIENRVVVDGNLITSRGPGTSMEFAFTIVEKLFGRQLGLELAKAMVFTRA 433
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0702 433 SUPERFAMILY Class I glutamine amidotransferase-like 45 228 IPR029062 -
Lele12g0702 433 CDD GATase1_DJ-1 252 415 - -
Lele12g0702 433 TIGRFAM not_thiJ: DJ-1 family protein 251 426 IPR006287 -
Lele12g0702 433 TIGRFAM not_thiJ: DJ-1 family protein 46 222 IPR006287 -
Lele12g0702 433 FunFam Protein DJ-1 homolog C 39 229 - -
Lele12g0702 433 FunFam Protein DJ-1 homolog C 244 433 - -
Lele12g0702 433 CDD GATase1_DJ-1 47 211 - -
Lele12g0702 433 Pfam DJ-1/PfpI family 251 413 IPR002818 -
Lele12g0702 433 Pfam DJ-1/PfpI family 45 210 IPR002818 -
Lele12g0702 433 SUPERFAMILY Class I glutamine amidotransferase-like 249 431 IPR029062 -
Lele12g0702 433 Gene3D - 37 238 IPR029062 -
Lele12g0702 433 Gene3D - 245 433 IPR029062 -
Lele12g0702 433 PANTHER PROTEIN/NUCLEIC ACID DEGLYCASE DJ-1-RELATED 45 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0702 Lele-ChrLele12 15200106 15203465 Wgd
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0702 12 15200106 15203465 Lele12g0702 12 15200106 15203465 ECH
Lele09g0619 09 4736964 4745453 Lele12g0702 12 15200106 15203465 hybridization
Lele10g0572 10 4194212 4197532 Lele12g0702 12 15200106 15203465 hybridization