Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0686 ATGGGGGGCGGCGAAGCAAGGAAGAAACCGAAGCGCGCGCAGCTCAATCCCAACTGGATCCAACTCCAACAAAAGCTCAAAACTCGGGGCTCTGATGCTTCAAGACCCTTCAAAAACTCCGAAGCTGAGACCCCAAACTCAGTATTGGGGAAGCGGAAAGAGAGGCAAGATGAAGAGTCCAATGATAGTGAGATTAATCCTCTTACTCCGGTAAATGATGATTCCAGTGTGACCGATGCAGTAGCCATGGACTGTGAAATGGTTGGTGTTGGTCAAGGAAACAGAAGTGCTCTTGGAAGAGTAACACTGGTTAATAGGTGGGGAAATATTATATATGATGAATTTGTTAGACCGGTTGAGCGCGTTGTTGACTTCCGTACCAAAATTAGTGGCATAAGACCTCGAGACTTGAGAAAAGCAAAGGATTTTTTGGCCGTTCAGAAGAAAGTGGCAGAGTTGATCAAAGGCAGGATCCTTGTGGGACATGCCATTAACAATGATCTTAAGGCATTATTATTAAGTCATCCCAAGAAGGATATTCGGGATACCTCTGAGTACCAGCCATTTCTAAAATCACATAGCAGAAGAGCTCTTCGACATCTTGCTGCTGAATATCTTGGCGCCAAGATCCAAACTGGGGAGCACTGCCCTATAGACGATGCTCGTGCGGCTATGCTGCTTTATCAAAAGAATAGAAAGGAATGGGAGAAGAGTGTAAAAGATCAAATTCGACTGAAACAGAAGCAGAAAAAACGGAGGCCGAAGAAGAAGCAAAAGAAGGAAGTTTCTCCAGATGGGAATGCCGCGGGAGGTGCTTCATCATAG 825 0.4545 MGGGEARKKPKRAQLNPNWIQLQQKLKTRGSDASRPFKNSEAETPNSVLGKRKERQDEESNDSEINPLTPVNDDSSVTDAVAMDCEMVGVGQGNRSALGRVTLVNRWGNIIYDEFVRPVERVVDFRTKISGIRPRDLRKAKDFLAVQKKVAELIKGRILVGHAINNDLKALLLSHPKKDIRDTSEYQPFLKSHSRRALRHLAAEYLGAKIQTGEHCPIDDARAAMLLYQKNRKEWEKSVKDQIRLKQKQKKRRPKKKQKKEVSPDGNAAGGASS 274
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0686 274 CDD REX4_like 81 229 IPR037431 GO:0006364|GO:0008408
Lele12g0686 274 FunFam Interferon-stimulated exonuclease gene 20 76 247 - -
Lele12g0686 274 PANTHER RNA EXONUCLEASE REXO1 / RECO3 FAMILY MEMBER-RELATED 38 249 - -
Lele12g0686 274 SMART exoiiiendus 79 237 IPR013520 -
Lele12g0686 274 MobiDBLite consensus disorder prediction 16 30 - -
Lele12g0686 274 MobiDBLite consensus disorder prediction 238 274 - -
Lele12g0686 274 Pfam Exonuclease 81 228 IPR013520 -
Lele12g0686 274 MobiDBLite consensus disorder prediction 47 62 - -
Lele12g0686 274 SUPERFAMILY Ribonuclease H-like 80 229 IPR012337 -
Lele12g0686 274 MobiDBLite consensus disorder prediction 244 258 - -
Lele12g0686 274 Gene3D - 75 255 IPR036397 GO:0003676
Lele12g0686 274 MobiDBLite consensus disorder prediction 1 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0686 Lele-ChrLele12 15084431 15087366 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0686 80 237 C2H2 Transcription Factor Family AT3G27970 35.057 6.73e-28 108