Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0681 ATGCGATTATCGTCCGCTTCCGGTTCGTCATTGGACCAGAGGAGACTTGATCGATCGGGGTCACGGCTTCGGAAGAAGCACAAGAGGCTAGACGCAATATGCGAAAGAGATTATAATCGGAACCATAGTGAATTGAATGAGGATGATGACGGGTTTGGTACTTCGGGCGCTGATACAGAACTACGCCGCAGCTCGAGGGTTCGGCGTGCTCCAGTTGTGCTCGAGACCTCTCCTCCTCCCCCTAAGAAACGGCGCAAGTTAGGTAAGAATGTAATGCTGAGGAGTGTGAGCGATGTCAAGAGCCCCGAACATGTGAATCAGAGTCCTCGTGGGGTAGAGCGTCGAGGAACATGGAGTTCAAGGTTGAGATCCAGGGAAAAAAATGTACGTTTCACGGTGAAGGGGGAGAGGGAATCACCGAGTGGTAAAAGGAAGCTGTTTCAGGATATGGACGAAAGCAGGGACAATGGAAAACCGGAGGTTCCAGAGATTAATAGGAAAGAGGAATTAGAAGGTGGGATGCCAAAGGTAGTTAAGTCAAAAAGACCAGGGAGGATCAAAGCAACAAAACATGCGGAAAAGCATAAACATAATGAGTCCCATGGGAGCTTAGATGAGAGCAAGATTCAAGAAGTGGAGCTTATTTTGAGCCAAGATGAGGAGAATGCTTCAGTTTCAGGATCTAAATTGTCTGATGAGAATGTAGTGGAAATAGTGGATGAGAATGCCTCTCCAAAGATAGAGACTAGCGAGAGAAACATATGTGATCATTTGCAGTCACAAGAGTCTAACGGTAATGTTGATCAATTGGAGAGTGTGAATGAAGGCGAAAATGGAAGAGATGCTGTAAAAATTGTTGAGAATCTGACAAAGCAAGTAGAAAATGAAGGATCTATAAGTAAGGAATCTACAGTTGAGGAACAGACCTTGCAAGATGAAAATATTGTAAAAATAGACAAGCCCAAACAAGCTTCAAATGATATAACTGACCAACCACGTATTAAAGAAGGAAGAAGGTGTGGTTTGTGTGGTAGAGGGACTGATGGTAAACCACCAAAAAGGTTGGTTCAGGATAATGGTGAGAGTGAGAATGAGGCATATAGTGGGTCTTCAGCATCTGAGGAGCCTAATTATGATCCTTGGGATGGTTTTGGCGATGAACCTGGCTGGCTTGGGCGTCTATTAGGTCCTATTAATGATCGCTATGGTATTGCTGGGATATGGGTTCATCAGCACTGTGCTGTGTGGAGTCCAGAGCATGCCAGATGGGTCAACCTTGGTTCTGACTGCTCCAAATGCTTTAGAATTAGTAGATTAAGGAACTCCAACCCGACAAAGGTATATTTTGCTGGCTTGGGATGCTTAAAAAATGTGAGGGCTGCACTTTGCAGAGGAAGGGCATTGAAGTGCACACGTTGTGGGAGGCGAGGGGCTACTATTGGCTGTCGGGTTGATCGGTGTCCAAAGACGTATCACTTGCCTTGTGCAAGAGCAAATGGTTGCATCTTTGATCATCGCAAATTTCTTATAGCCTGTATAGATCATAGACATTTCTTTCAGCCTCAGGGTAATCAATATTTAGCGCGGATAAAGAAATTGAAAGCTAGGAAGATGAAGTTGGAGATGAGAAAGCTTTCAAATGATGCTTTGAGAAAGGATATTGAAGCAGAAGAAAAGTGGTTGGAGAACTGTGGTGAGGATGAAGAATTTTTGAAACGGGAGAACAAGAGGCTTCATCGTGATTTATTGAGAGTAGCCCCTATATACATTGGTGGTCCTGACTCTGATGGTGAAAAATCATTTCAAGGTTGGGAATCTGTTGGTGGACTCAAGGATGTCATCACTTGCATGAAAGAAGTTGTTATTTTACCTCTGCTTTACCCTGAGTTCTTTGATAATTTAGGTCTTACACCTCCAAGAGGTGTTCTTTTGCATGGATATCCTGGAACAGGAAAAACTTTAGTAGTTAGAGCATTGATAGGTGCATGTGCTCGGGGTGATAAACGGATTGCATACTTTGCTCGTAAAGGTGCGGATTGCTTGGGGAAATATGTGGGTGATGCAGAACGCCAACTGAGATTACTATTCCAGGTTGCTGAAAAATGTCAACCTTCTATAATATTCTTTGACGAGATAGATGGATTGGCACCAAGCCGTACTAGGCAGCAAGATCAGACACATAGTTCTGTTGTTTCAACACTGCTTGCCCTTTTGGATGGTTTGAAATCTAGGGGTTCAGTTGTAGTCATAGGTGCAACAAATCGTCCTGATGCCATTGACCCAGCACTTAGACGTCCTGGAAGATTTGATCGGGAAATTTATTTTCCATTGCCATCAATTGAGGACAGAGCTTCCATTCTCTCGCTTCACACACAGAGGTGGCCAAAACCAATCACTGGATCCTTACTTAAGTGGGTTGCAAGAAAAACTCCTGGATTTGCTGGTGCAGATCTCCAGGCTCTCTGTGCCCAAGCTGCCATGAATGCTTTGAAGAGAAACTTTCCTTTGCAACAAGTGCTGTCTGCAGCATCAGAGGAAGATTCTAGTGGTAAGCGCTTTCCTCTGCCATCCTTTGCGGTGGAGGAAAGGGATTGGTTGGAGGCTATATCATGTGCACCACCACCATGCTCCCGAAGAGAAGCTGGGAATGCTGCAAATGACATAGTATGCGCCCCTCTTCCCACCCCCCTTATACCTTGTTTGCTGCAACCATTATGCACTCTGCTTGTATCTCTGTATCTTGATGGATGCCCATGGTTGCCACCTCCTATGTTTAAAGCTGCAACAAGGATTAAAAGTTCAATGATTTCTGCTCTGGACAAAAAGAAAATGTCTATTGATCAGTGGTGGGTGCATGTTGATGATTTTCTTCAAGACACAGATTTTGCTGCCAATTTAGGGAGGAAACTCACATGTGCTGGCATTTTATCTGCAAATGATGACCATGCTGGTTCTTGTGATCCTGTAGATGATACTGATGGCGAGGCTAAACTTGAACCTTCAATGAAGCCACATGTCAGCACATGTAGTGGTTTATTGTCAAATAAGTCATTTATGGTGTCCAGGAAATCAGGATTTCGGATATTTATTTCTGGAAATCCCAAATCTGGTCAGAGACATCTTGCTTCCTGCCTTCTTTACTGCTTTGTTGGTAATGTGGAAATTCAGAAGATTGATATGGCAACTATTTCACAAGAAGGATATGGAGATGTGGTACAAGGAATTTCACAAATATTAATGAAATGTGCTCGTGTGCAATCATGTGTAGTCTTCATGCCAAGAATTGATCTGTGGGCCGTGGAGACTCATTTTCAGGTTGCTGAAAATTCTGATTGCTGCTTCACGGATGATCAAGTTTCTGAGATGGAAGAGTCTTGTTTAACACTGAGTCAGGTTGTTGAAAAGAAAAATGAATTCAATTCAAAGAAAAGAAAATCAGTAGATATGGCCAAAGGTCAAGTCATCTTAAGGGCTTCACATGCCTGGATGTCATTTATTGAGCAGGTGGAGTCCATTGGTGTATCTACATCCTTGATAATTCTGGCTACTTCAGATGTCCCATATTCAGAACTTCCATGTAAAGTAAGGGAGTTCTTTAGGAGTTATCTATCTAGCTGCAGCCAATCTGCTTCATTGGTGCAGACAGTGCCTCGTTTTTCTGTGCAGATGGAGGGGAACTTTAATAATGATGTTATGATCAATCTATGCACATTGGAGCTAATGAGAAATGTAATTGAGCAGCTGGTTCAATTGGCCCACAAAAAATCTCATATGCATATTGGAGCCCAGAAAGGGCACATAACCTGTGATTCAGCTCTAGGTTGTAAAGGTAGGGCATGTCTGGGAAAAGATAATGAATCAGTCGATGGTGATAAGGTTAAAGTCCAACTTCCTGAACCATCTACTAAAGTTCCACCACCACCTAACAGCATGCCCCTGAAGCAAAAGTCAACCCTGTTGTTGGCAATATCAACCTTTGGTTATCAAATTATTCGGTTCCCTCATTTTGCAGAACTTTGTTGGGTTACATCAAAACTCAAAGAAGGTCCTTCTGCTGATGTAAGGGGACCTTGGAAGGGTTGGCCTTTCAATTCCTGCATAATTCGTCCTAGTATCCTGCAAGACAAGGTGGCTAATTCTTGCAGCTCAAGCAATATGAAAAACAAAGAAAAATATGGTGTTGTCAGTGGCCTAGTGGCTGTTGGTTTGTCAGCATACAGAGGTATTTATACATCTGTTAGGGAAGTTTCTAGTGAGGTACGCAAGGTTCTTGAGATATTAGTGGGGAAAATCAACACAAAAGTTCAAGATGGTAAAGATAGATATCAATTTCTTCGTATTCTATCGCAAGTGGCTTATTTGGAAGATATGATCAATAACTGGGCCTATGCATTGTTGAGTCATGAGCAGGACTCCCCAGACCTGGCAGCAAAACTTACACCAACTAGTGTCGAGTCAGTAATCAGACATGAAAACCAACAAGTTGAAGGTGAGGGTTGCCAGTTGATTGCCCCCTTGGAAGGTCATGAGCCAGAGAAGCTGGAGAGAAGTCCCAATGCAATTGCTGCCAAGACACCTGAATCTCTTGCCTTGAATAACGGAAATGATAATGTGGCTAATGTTGATCATGATGGCAAAGTTTCAGAAGGATCTCCACAAAATAGTTCTTTTTCAGATGATCATATTAACAACTCTGCTGCCATGAACCAGCCCGTTGATCCAGTTACAATTGTGGAGAATGGCACACTGTCTAAAGTATCTGAATCAGGAACAACGGGAAATCCTGAAATGATGAATGGAGAAATTGGGCCCTTAAGAGGCTCAAATGGATCTTCACTCGCTCACACTGTCTCTCTTTCTGGAAATGAAGAGTTCATATTGTCAAAAGGCTTAAATGGGTCCACATCTACCCATCCTGTTTCCCTTTCTGATGATGAACTTCACAATGCCTGCCAATCAGAGGGTGTTGAGATTGAAGACTCCAGGATATCCTCTATTACTGTTCCCAGCTTGTCGTCAGCAGAGACTGGTATTAAATTAAGTGGTAGTGACTCTGGTGTAGATGCCAATGCTGTAGAAATTAGTGACTCTCCGAGTAAAGGCAGTGGTCCTGCTGAATCTGGGCTTGTCTGTTTGTATCTATGTTGCCCCGGATGCCTCGACAGTCTTTTTCCTTTGACACGCAAAATCCTTGTTCACGAGTGTAGCTTGAATAGAAGCGGTTGGACTGTAGAAGATGTACATGATGTTCTTGCATCATTATCTGTGGATCTTACTTCAGCGGTTAAAAATCTTTATTCTGCTGAAGATTTCAATGACTTATCCAATAAAACCTCCGGCCCCACAACGTCTGAAGTGCCCCTTGACTGTTCAAGCTCAAGAATGGGTAACCCCGGAAATCTAGACAGTTTTTTTGTGCCAGCTGAATGTGCATCTCACACCCCAAGCCAACACACAGCTGGAAGCAAAGATACGACATTGAATGAATTGAAGCTTGATTTAAAATTTGTTTTCAGAGATGGTGTACTGGTTCAAATGGACCCTGATAGAGAAGTCTCTCTTCACTGTAAATTTGAGACCTTGTGCCTTTGTTCTTTTAAAGAGTTGATATTCTTAACACCAGCAGCGATCAAAGATCTTCCAATCACTCCTGACTACTAA 5661 0.4298 MRLSSASGSSLDQRRLDRSGSRLRKKHKRLDAICERDYNRNHSELNEDDDGFGTSGADTELRRSSRVRRAPVVLETSPPPPKKRRKLGKNVMLRSVSDVKSPEHVNQSPRGVERRGTWSSRLRSREKNVRFTVKGERESPSGKRKLFQDMDESRDNGKPEVPEINRKEELEGGMPKVVKSKRPGRIKATKHAEKHKHNESHGSLDESKIQEVELILSQDEENASVSGSKLSDENVVEIVDENASPKIETSERNICDHLQSQESNGNVDQLESVNEGENGRDAVKIVENLTKQVENEGSISKESTVEEQTLQDENIVKIDKPKQASNDITDQPRIKEGRRCGLCGRGTDGKPPKRLVQDNGESENEAYSGSSASEEPNYDPWDGFGDEPGWLGRLLGPINDRYGIAGIWVHQHCAVWSPEHARWVNLGSDCSKCFRISRLRNSNPTKVYFAGLGCLKNVRAALCRGRALKCTRCGRRGATIGCRVDRCPKTYHLPCARANGCIFDHRKFLIACIDHRHFFQPQGNQYLARIKKLKARKMKLEMRKLSNDALRKDIEAEEKWLENCGEDEEFLKRENKRLHRDLLRVAPIYIGGPDSDGEKSFQGWESVGGLKDVITCMKEVVILPLLYPEFFDNLGLTPPRGVLLHGYPGTGKTLVVRALIGACARGDKRIAYFARKGADCLGKYVGDAERQLRLLFQVAEKCQPSIIFFDEIDGLAPSRTRQQDQTHSSVVSTLLALLDGLKSRGSVVVIGATNRPDAIDPALRRPGRFDREIYFPLPSIEDRASILSLHTQRWPKPITGSLLKWVARKTPGFAGADLQALCAQAAMNALKRNFPLQQVLSAASEEDSSGKRFPLPSFAVEERDWLEAISCAPPPCSRREAGNAANDIVCAPLPTPLIPCLLQPLCTLLVSLYLDGCPWLPPPMFKAATRIKSSMISALDKKKMSIDQWWVHVDDFLQDTDFAANLGRKLTCAGILSANDDHAGSCDPVDDTDGEAKLEPSMKPHVSTCSGLLSNKSFMVSRKSGFRIFISGNPKSGQRHLASCLLYCFVGNVEIQKIDMATISQEGYGDVVQGISQILMKCARVQSCVVFMPRIDLWAVETHFQVAENSDCCFTDDQVSEMEESCLTLSQVVEKKNEFNSKKRKSVDMAKGQVILRASHAWMSFIEQVESIGVSTSLIILATSDVPYSELPCKVREFFRSYLSSCSQSASLVQTVPRFSVQMEGNFNNDVMINLCTLELMRNVIEQLVQLAHKKSHMHIGAQKGHITCDSALGCKGRACLGKDNESVDGDKVKVQLPEPSTKVPPPPNSMPLKQKSTLLLAISTFGYQIIRFPHFAELCWVTSKLKEGPSADVRGPWKGWPFNSCIIRPSILQDKVANSCSSSNMKNKEKYGVVSGLVAVGLSAYRGIYTSVREVSSEVRKVLEILVGKINTKVQDGKDRYQFLRILSQVAYLEDMINNWAYALLSHEQDSPDLAAKLTPTSVESVIRHENQQVEGEGCQLIAPLEGHEPEKLERSPNAIAAKTPESLALNNGNDNVANVDHDGKVSEGSPQNSSFSDDHINNSAAMNQPVDPVTIVENGTLSKVSESGTTGNPEMMNGEIGPLRGSNGSSLAHTVSLSGNEEFILSKGLNGSTSTHPVSLSDDELHNACQSEGVEIEDSRISSITVPSLSSAETGIKLSGSDSGVDANAVEISDSPSKGSGPAESGLVCLYLCCPGCLDSLFPLTRKILVHECSLNRSGWTVEDVHDVLASLSVDLTSAVKNLYSAEDFNDLSNKTSGPTTSEVPLDCSSSRMGNPGNLDSFFVPAECASHTPSQHTAGSKDTTLNELKLDLKFVFRDGVLVQMDPDREVSLHCKFETLCLCSFKELIFLTPAAIKDLPITPDY 1886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0681 1886 MobiDBLite consensus disorder prediction 1530 1567 - -
Lele12g0681 1886 CDD AAA 636 777 - -
Lele12g0681 1886 MobiDBLite consensus disorder prediction 28 49 - -
Lele12g0681 1886 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 604 869 IPR027417 -
Lele12g0681 1886 Pfam AAA+ lid domain 803 835 IPR041569 -
Lele12g0681 1886 MobiDBLite consensus disorder prediction 1 229 - -
Lele12g0681 1886 MobiDBLite consensus disorder prediction 258 273 - -
Lele12g0681 1886 MobiDBLite consensus disorder prediction 1547 1567 - -
Lele12g0681 1886 FunFam ATPase family, AAA domain-containing 2 601 784 - -
Lele12g0681 1886 FunFam p-loop containing nucleoside triphosphate hydrolase superfamily protein 778 870 - -
Lele12g0681 1886 MobiDBLite consensus disorder prediction 295 316 - -
Lele12g0681 1886 MobiDBLite consensus disorder prediction 193 215 - -
Lele12g0681 1886 Gene3D - 778 870 - -
Lele12g0681 1886 ProSiteProfiles Extended PHD (ePHD) domain profile. 379 516 IPR034732 -
Lele12g0681 1886 Pfam ATPase family associated with various cellular activities (AAA) 642 777 IPR003959 GO:0005524|GO:0016887
Lele12g0681 1886 SMART AAA_5 638 779 IPR003593 -
Lele12g0681 1886 MobiDBLite consensus disorder prediction 337 381 - -
Lele12g0681 1886 MobiDBLite consensus disorder prediction 258 279 - -
Lele12g0681 1886 ProSitePatterns AAA-protein family signature. 747 765 IPR003960 GO:0005524|GO:0016887
Lele12g0681 1886 MobiDBLite consensus disorder prediction 361 375 - -
Lele12g0681 1886 PANTHER AAA DOMAIN-CONTAINING 443 1777 IPR045199 -
Lele12g0681 1886 MobiDBLite consensus disorder prediction 116 178 - -
Lele12g0681 1886 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 334 518 IPR013083 -
Lele12g0681 1886 Gene3D - 603 879 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0681 Lele-ChrLele12 15054985 15063360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0681 604 839 Calmodulin-binding Proteins AT3G56690 41.597 8.74e-46 179