Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0677 ATGGATGGCTACTTCCATGTCCATAATGGTGACACTCATCTTCCTCCTGGGTTTCGTTTCCACCCAACTGACGAAGAACTCATTACATTTTACCTCCTCAAGAAGGTTCTAGACAACACCTTCGCAGGGAGAGCCATTGCTGAAGTTGATCTTAACAAGTGTGAGCCATGGGAGCTTCCTGGCAAATTTGCTTATCATTATCTTTCACGTAGCTCAAAGGATGAATGGGTCATCTCGCGTGTTTTCCAGAAGAGTCTCTCCTCCACGGGGAACAGCAGCTCCGCCGTGTCGTCCGCCGGTGGCTCCAAGAAGACGAACACGAGAATGAGTTCTTCTGTTAACGTGAGCGTTTACCCAGAACCCACTTCTCCTTCCTCCATCTACCTTCCTCCTCTGCTTGACTCGTCTCCTTACGCGGCCGCCCACGACCTTGACAGCTGCTCCTACGACGGCAGCAGCACTAATCCGAGGGAGCACGTGTCCTGTTTCTCCACATTCTCTGCGTCTGCTGCCTCCAACAACCTATCCAATGTTAGCTATGAGCTCGCTCCTGCTCTTCCTCCGCCGTCAGTGGCTCTGAACCCATTTGCTCGATTCCAGAACAACGTTGGTGTTCCTGCGTTCCCAAGCCTGAGGTCACTGCAGGAGAATCTCCAACTTCCTTTCCTGACTCCGGCCATACATCGTGGTCCATCCGGTGGTGACATGAAAGGTTGGGCTAAGCCGGAGGAGCAGAATGTGGCGGGTGGCGGTTCTTCTGGCGTGTCGCTGTGTCCGTCGTCGGAGCTTGATTACGTGTGGAGCGGCTACTAG 813 0.5338 MDGYFHVHNGDTHLPPGFRFHPTDEELITFYLLKKVLDNTFAGRAIAEVDLNKCEPWELPGKFAYHYLSRSSKDEWVISRVFQKSLSSTGNSSSAVSSAGGSKKTNTRMSSSVNVSVYPEPTSPSSIYLPPLLDSSPYAAAHDLDSCSYDGSSTNPREHVSCFSTFSASAASNNLSNVSYELAPALPPPSVALNPFARFQNNVGVPAFPSLRSLQENLQLPFLTPAIHRGPSGGDMKGWAKPEEQNVAGGGSSGVSLCPSSELDYVWSGY 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0677 270 Pfam No apical meristem (NAM) protein 15 104 IPR003441 GO:0003677|GO:0006355
Lele12g0677 270 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 13 62 - -
Lele12g0677 270 SUPERFAMILY NAC domain 6 70 IPR036093 GO:0003677|GO:0006355
Lele12g0677 270 ProSiteProfiles NAC domain profile. 14 167 IPR003441 GO:0003677|GO:0006355
Lele12g0677 270 Gene3D NAC domain 23 110 IPR036093 GO:0003677|GO:0006355
Lele12g0677 270 MobiDBLite consensus disorder prediction 87 108 - -
Lele12g0677 270 MobiDBLite consensus disorder prediction 234 253 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0677 Lele-ChrLele12 15028556 15030281 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0677 57 223 NAC Transcription Factor Family AT5G53950 40.323 1.25e-20 88.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele12g0677 NAM 3.6e-15 No_clan