Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0671 ATGGTGGACGCAGCAGGTTTGGCTGAGGCAGCAGGATTAAGATTCACTTCATTGGCGCTGATTGGGCAGGGATCATTTGGGGACGTTTATAAAGGCTTTGACAAGGAGCTCAACAAAGAAGTTGCAATCAAAGTGATTGATTTGGAAGAATCAGAGGATGAGATTGAAGATATTCAGAAGGAAATTTCTGTTCTGCAACAATGTCGATCTCCATATATTACTGAGTATTATGGTTCCTATCTCAATCAAACTAAACTTTGGATAATAATGGAATACATGGCTGGTGGCTCTGTTGCTGACCTACTCCAGTCAGGTCCTCCTCTTGATGAAATGTCAATTGCTAGCATTCTACGGGACTTGTTGCATGCAATTGATTACTTACACAGTGAAGGAAAAATCCATAGAGACATCAAAGCTGCAAACATTTTATTGACCGAGAACGGTGATGTGAAGGTTGCAGATTTTGGTGTTTCTGCTCAGTTAACAAGGACCATATCAAGGAGAAAGACGTTTGTAGGAACCCCATTCTGGATGGCACCAGAGGTCATTCAAAATTCAGATGGATATAATGAGAAGGCAGATATCTGGTCTTTAGGGATCACTGCAATTGAGATGGCAAAGGGGGAGCCTCCACTTGCTGATCTTCACCCAATGAGAGTGCTTTTTATCATACCCCGAGAGAATCCACCCCAGCTGGATGAGCATTTTTCTCGTCCCATGAAAGAATTTGTGTCTTTGTGTCTAAAGAAGGTTCCTGCTGAGAGGCCAAGGGCTAAGGAACTTCTCAGACATCGTTTTATTCGGAATGCGAGGAAAAGTCCCAAGCTTTTGGAGAGAATAAGGGAGCGCCCAAAATACCAAATAAAGGAAGATCAATCAACCCCTAGAAATGGCCCACGAGGGACAGAGGTGGGAACTGATACTCTGAAGGTGGTAGGAGATACAAGAGGCGAAGAAGCTCAAAGACCTAGTGGTCAGGATAAAAGCGTGAAAAATGCTGGATGGGACTTCAGCATTGGTGGATCTCAGGGTACTGGAACCATTCGCAGTTCACGTCCTCCTCATAGTCCAATAACTTTTTCTAATCAAAGAAAAACTTCAGAGGGTGGCCATCAAGGGGCATCTGCCTACAGAAGTAGACTTACTGAGTCTTCAGAAACTACCTCTGGAAAAGATGTTCGGGCTCCTTATCTTGATGAGCGCAAGGGCAATCACCTGGATGATGATGAATTGTCTGGCAACGAATCAGGAACTGTTGTTATTCGATCTCCAAAAGGATCACATCCATCATTGAGTCGTGATCATAGCTCTCTGTCTAGCAGCAGTTTTTTCTCTCTTGAAGATTCTTCTACCAGTGGAACTATTGTTTTCCGTGGTCAGCATGATGACTCTGATTTGCAGACAGTAAGATCCAGACTGGGTCTTCAGGAGAGAACTTCAAACGCCTTTCTAGAGGATAGTGCTGCAAATCTTGCTGAGGCGAAAGCTGCCATGCAAGGGGGATGGAAAGGGAATGCCTGGGACAGATTTGTCATGGAAAAGGTCAATAATGATTCACAAGAAGGCAGGAGAAACCAAGCAACAGGCAGCCCTGATTCTTCCAGTTCATCTTGCGATTATATGGATGCACAAAAGGGAATTTCAAGATCTCGCAATCCTAGGGATGACGAAGAAACTGCCAAAATTATGTCATCCTCTGTACCATTATCAAATTTGCTTATTCCTTCAGTGAAAGAGGCTATTGCTAATGATCCAGAAAGCTCAATTGTAGAAGAAGTCGTCAATTCACTAGTCAGCATGAAACGGGAAAATCCTAAATCCTGTGACATTCTTGTCAAAAAGTTGCTTCAGCGGTTGGCAAGTTCAAAGGAATCTTCATTGAAGGAGCTGCAGGAGCTGGCAGGTGACTTATTCGGCAAGTCAACTTCAGAAGAAACTCGAAACACAAGCTTGGCAACTGATGACCGGAGGAAGCAGGAGAACAAGGATACCCACTCAAACAGCAATTTAAGCCCACTCGCAAAATTTCTTCTCTCCAGATGGCAAGGTCAAGTGTCAAGGGATCTAAATCCAACTTAA 2079 0.4377 MVDAAGLAEAAGLRFTSLALIGQGSFGDVYKGFDKELNKEVAIKVIDLEESEDEIEDIQKEISVLQQCRSPYITEYYGSYLNQTKLWIIMEYMAGGSVADLLQSGPPLDEMSIASILRDLLHAIDYLHSEGKIHRDIKAANILLTENGDVKVADFGVSAQLTRTISRRKTFVGTPFWMAPEVIQNSDGYNEKADIWSLGITAIEMAKGEPPLADLHPMRVLFIIPRENPPQLDEHFSRPMKEFVSLCLKKVPAERPRAKELLRHRFIRNARKSPKLLERIRERPKYQIKEDQSTPRNGPRGTEVGTDTLKVVGDTRGEEAQRPSGQDKSVKNAGWDFSIGGSQGTGTIRSSRPPHSPITFSNQRKTSEGGHQGASAYRSRLTESSETTSGKDVRAPYLDERKGNHLDDDELSGNESGTVVIRSPKGSHPSLSRDHSSLSSSSFFSLEDSSTSGTIVFRGQHDDSDLQTVRSRLGLQERTSNAFLEDSAANLAEAKAAMQGGWKGNAWDRFVMEKVNNDSQEGRRNQATGSPDSSSSSCDYMDAQKGISRSRNPRDDEETAKIMSSSVPLSNLLIPSVKEAIANDPESSIVEEVVNSLVSMKRENPKSCDILVKKLLQRLASSKESSLKELQELAGDLFGKSTSEETRNTSLATDDRRKQENKDTHSNSNLSPLAKFLLSRWQGQVSRDLNPT 692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0671 692 Coils Coil 41 68 - -
Lele12g0671 692 MobiDBLite consensus disorder prediction 517 563 - -
Lele12g0671 692 MobiDBLite consensus disorder prediction 336 391 - -
Lele12g0671 692 PANTHER STERILE20-LIKE KINASE, ISOFORM B-RELATED 13 637 - -
Lele12g0671 692 Gene3D Transferase(Phosphotransferase) domain 1 13 300 - -
Lele12g0671 692 Coils Coil 613 633 - -
Lele12g0671 692 SUPERFAMILY Protein kinase-like (PK-like) 14 305 IPR011009 -
Lele12g0671 692 CDD STKc_MST3_like 14 287 - -
Lele12g0671 692 ProSitePatterns Protein kinases ATP-binding region signature. 21 44 IPR017441 GO:0005524
Lele12g0671 692 MobiDBLite consensus disorder prediction 277 444 - -
Lele12g0671 692 ProSiteProfiles Protein kinase domain profile. 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0671 692 MobiDBLite consensus disorder prediction 416 444 - -
Lele12g0671 692 MobiDBLite consensus disorder prediction 393 412 - -
Lele12g0671 692 MobiDBLite consensus disorder prediction 649 664 - -
Lele12g0671 692 FunFam serine/threonine-protein kinase dst1 isoform X1 12 300 - -
Lele12g0671 692 MobiDBLite consensus disorder prediction 641 669 - -
Lele12g0671 692 MobiDBLite consensus disorder prediction 521 543 - -
Lele12g0671 692 SMART serkin_6 15 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0671 692 Pfam Protein kinase domain 16 267 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0671 Lele-ChrLele12 14987876 14996028 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0671 1 689 MAP Kinase Kinase Kinase Kinase AT3G15220 63.158 0.0 803
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE20-YSK Lele12g0671 Pkinase 1.8e-68 CL0016