Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0670 ATGGTGGGCTCAGGAGCATCAGATAGGAGCAAAGAAGCTGTTGGGATGATGGCCCTTCATGAGGCCCTCAGAACCGTCTGTCTCAACTCAGACTGGACTTACTCTGTCTTCTGGACCATCCGGCCTCGCCCAAGAGTCAGAGGAGGTAATGGCTGCAAGGTTGGGGACGATAACGGCAGCTTGATGCTGATGTGGGAAGATGGGTTTTGCCGAGGAAGGGTTTCAGATTGTCTGGAGGAGATGGAAGGAGAGGATCCGGTCAGAAAAGCCTTCAGCAAAATGTCCATTCAGTTATATAATTATGGAGAAGGGTTGATGGGGAAGGTTGCATCTGACAAGTGCCACAAGTGGGTCTTCAAAGAGCCAACAGAATGTGAACCCAACATCTCCAACTACTGGCAGAGCTCATTTGATGCTCTCCCTTCGGAATGGACCGACCAGTTTAATTCAGGCATTCAGACCATCGCTGTAATTCAAGCTGGCCATGGCCTTCTCCAACTTGGCTCTTGCAAGATTATTCCTGAAGACCTCCATTTTGTGCTGAGAATGAGGCATACATTTGAATCTCTGGGGTATCAATCTGGGTTTTACCTCTCACAGCTCTTCTCTTCCACAAGAAACACTTCGGCTTCGACTTCGCTACCTTCGAAACCGTCGTCCACCTTGCCGATTCGAGCGACGCCTCCTCTCTTTAACTGGGGTCAAAGGCCAATGGTAGCTTCAGCTGCGGCAGCTTCAATGCTATCATCACCCAATTTTCAACACACGGCGAGGCTAGGAGGGTTCCCACAACAGGCGAAAGACGAGACGCATGTATTTCTGATGCCTCATCATCATTCGTCGTCTGATCAACAACCAGCAACTGCAAGAATGGAAGATATGATGGGAGAGAATGAGAATGATATAAAATGGCCAAATGGGTTGTCCTTTTTCAATGCTCTCACAGGACAAAACGATGATGCTACTAAGCTTTTGTTCAATCCAGAGAGCTTAGATAACAAAGCAGCTGACGAAGCATCGAACCCGAACCCGAACCCGATCGAGTTCTTGAGCTTGGACAGCCATCACCAGACAGAAAGTGGGAGGAAAATGGACAAGTTCAAGAGGAGCTTCACTCTACCTGCTAGAGTGGCTTCATCTTCTTCATCAACCTCGATGGATCATCATCATCAGCAGCAACAACAGCGACCTGTGGAATATAGGAACTCTGAAGGAGTTATGTACTCGGATGTTATGGAGACCTTTTTGGAGTAA 1254 0.4817 MVGSGASDRSKEAVGMMALHEALRTVCLNSDWTYSVFWTIRPRPRVRGGNGCKVGDDNGSLMLMWEDGFCRGRVSDCLEEMEGEDPVRKAFSKMSIQLYNYGEGLMGKVASDKCHKWVFKEPTECEPNISNYWQSSFDALPSEWTDQFNSGIQTIAVIQAGHGLLQLGSCKIIPEDLHFVLRMRHTFESLGYQSGFYLSQLFSSTRNTSASTSLPSKPSSTLPIRATPPLFNWGQRPMVASAAAASMLSSPNFQHTARLGGFPQQAKDETHVFLMPHHHSSSDQQPATARMEDMMGENENDIKWPNGLSFFNALTGQNDDATKLLFNPESLDNKAADEASNPNPNPIEFLSLDSHHQTESGRKMDKFKRSFTLPARVASSSSSTSMDHHHQQQQQRPVEYRNSEGVMYSDVMETFLE 417
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0670 417 Pfam bHLH-MYC and R2R3-MYB transcription factors N-terminal 19 187 IPR025610 -
Lele12g0670 417 MobiDBLite consensus disorder prediction 374 400 - -
Lele12g0670 417 PANTHER GB|AAF34833.1 1 417 IPR044170 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0670 Lele-ChrLele12 14972017 14974233 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0670 20 228 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G31280 32.227 3.11e-22 97.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0670 12 14972017 14974233 Lele12g0670 12 14972017 14974233 ECH
Lele09g0655 09 4992378 4994547 Lele12g0670 12 14972017 14974233 hybridization
Lele10g0600 10 4428402 4430606 Lele12g0670 12 14972017 14974233 hybridization