Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0668 ATGGAGGCCAAAAGTATAGAGAGGAAACAACCATTCACTGAGAAGTCAAAGGATAACATAATTGAAGAAGCAGAAGATGAAGAAGAGGAAAAGAAGAAATGGGTTGTTGTTGGTGGGAGTAACAGAAGAGGATCAAGTGGTCGTTATAAAGCTTCTTCAGCTTCCTGTCTAGCAGATAGCTGTGGAGCTAACTTGGCTTATTCAAAGCGATACCATCGCCGGCATAAAGTTTGTGAGTTTCATTCAAAGGCGCCTGTTGTGATGGTTGCAGGGATGAGGCAGAGGTTTTGCCAGCAATGTAGCAGGTCCCGTGACATAGGGGAATTTGATGAGGCCAAGAGGAGCTGCCGGAGAAGATTGGCGGAGCATAATGAGAGGCGGTGGAAAAGTAATGCAGAAACTCACAATGTTGGCGGCGAAGGGCATCATCAGAATCCAATGGAAGGGCGTTTCAGGCATATTGATGACAGAGGAAGAAGAGCGAATCAGATGAACGTTAATAATTCTGGGAATTGGAGCAGCAAGTCTTTTCATATCAGATAA 543 0.4494 MEAKSIERKQPFTEKSKDNIIEEAEDEEEEKKKWVVVGGSNRRGSSGRYKASSASCLADSCGANLAYSKRYHRRHKVCEFHSKAPVVMVAGMRQRFCQQCSRSRDIGEFDEAKRSCRRRLAEHNERRWKSNAETHNVGGEGHHQNPMEGRFRHIDDRGRRANQMNVNNSGNWSSKSFHIR 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0668 180 Pfam SBP domain 56 129 IPR004333 GO:0003677
Lele12g0668 180 ProSiteProfiles Zinc finger SBP-type profile. 53 130 IPR004333 GO:0003677
Lele12g0668 180 MobiDBLite consensus disorder prediction 122 150 - -
Lele12g0668 180 Gene3D - 51 117 IPR036893 GO:0003677|GO:0005634
Lele12g0668 180 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 41 139 IPR044817 GO:0003677
Lele12g0668 180 SUPERFAMILY SBT domain 55 134 IPR036893 GO:0003677|GO:0005634
Lele12g0668 180 MobiDBLite consensus disorder prediction 1 31 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0668 Lele-ChrLele12 14964796 14965416 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0668 47 133 SBP-box Gene Family AT2G33810 59.770 1.18e-33 114
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele12g0668 SBP 3.6e-27 No_clan