Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0663 ATGCCGTCCCTTCAGCTACACACGGTGTACCCTCGCAATTTACACGCCTGCTCCTACCCCCCCCCCCCCTTCTCTCATCTGCCCCATGCATCGGGTAATCTTTGTCCTTCCCCCCATCACTTCCTCTTTTTATATCTCTCTCTTCTTCTTCCTCCCAGCTCCCACCTGCTTCTTCATCTTCTGCTACCCTGCTACCTCCACTTTCCGATCATGGCGGCTCGCTCACCTCTCACCTTCCTCCTCCTTCTCAGCCTTCTTTGTCTCTCCCATGCTCGTAACTTCTACGTCGGTAACTCAGATGGTTGGGTCTTGAACCCCTCCGAGAGTTACAGTCAATGGTCTTCTCGAAACAGATTTCAGGTCAATGACGTTCTCGTGTTTAAGTACCAGAAGGGTTCGGACTCGGTGTTGGAGGTGAGCAAGGAGGATTACGACAAGTGTAATACCAAAAACCCTATCAAGAAGTTTGAAGATGGTGACTCGCAGATGACGCTTGATCGATCAGGACCTTTCTACTTTATCAGTGGACATGATGGGAATTGTGACAAGGGTCAGAAGTTGATTGTTGTTGTGTTATCTGTCCGATCATCATCACCGGGAAAGCCATCGCCTGGTACTCCGGGAACTCCCTCTACTCCCAAAGCTCCTTCTCCTTCTAATGGAGGCACTACCCCTGGTTCACCTCCAGGATCTCCGATGACTACGCCTACCGTTCCCTCCCCCTCTGGTAACCCTCCGCCGTCCACCCCGGCATCTCCTGCACCGGGAAGTTCTCCCACAGCTCCATCCACATCGCCCAATCCACCATCTCAGGCACCGGGAGGCTCTACGACAACGCCATCTCCGGGCAACAGTCCTCCGGTGGGTAATTCTCCTTCCACAACACCGTCTTCACCAACTATGGCACCAGCCAATGCACCTGGACAATCATCTCCGGTGGGTAGCTCTCCATCCATGACACCGAACGCACCATCTATGTCTCCGGGTGGATCTCCGACAGGAGGGTCTCCAATGGGTAATGCTCCATCCATGACCCCGAACACACCATCGATTGCTCCGGGAGGATCTCCGATGGGAGTGTCTCCAATGGGCAGTCCTCCGATGGGTTCGGGATCACCGGAGATGTCTCCATCAGCCTTATCTCCAGCTACTTCACCAGCATCATCGTCACCTATGGGATCCCCACCGGAAACTACAGCAACCACTCCATCTGGTTCGCCGGCATCGGGCCCAGCAGATTCTACAGCACCCTCAACGTCCAATGACTCGACACTGCCGGCTCTATCATCAGCATGGGCTGAAACTGCTCCGAACTTGTTGGGGTATACAGTTACTATTATGGTCGGTGCTGCTCTCAGTACCATTTTTGGTGCTTAG 1377 0.5374 MPSLQLHTVYPRNLHACSYPPPPFSHLPHASGNLCPSPHHFLFLYLSLLLPPSSHLLLHLLLPCYLHFPIMAARSPLTFLLLLSLLCLSHARNFYVGNSDGWVLNPSESYSQWSSRNRFQVNDVLVFKYQKGSDSVLEVSKEDYDKCNTKNPIKKFEDGDSQMTLDRSGPFYFISGHDGNCDKGQKLIVVVLSVRSSSPGKPSPGTPGTPSTPKAPSPSNGGTTPGSPPGSPMTTPTVPSPSGNPPPSTPASPAPGSSPTAPSTSPNPPSQAPGGSTTTPSPGNSPPVGNSPSTTPSSPTMAPANAPGQSSPVGSSPSMTPNAPSMSPGGSPTGGSPMGNAPSMTPNTPSIAPGGSPMGVSPMGSPPMGSGSPEMSPSALSPATSPASSSPMGSPPETTATTPSGSPASGPADSTAPSTSNDSTLPALSSAWAETAPNLLGYTVTIMVGAALSTIFGA 458
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0663 458 PANTHER BLUE COPPER PROTEIN 89 261 IPR039391 GO:0009055
Lele12g0663 458 MobiDBLite consensus disorder prediction 371 425 - -
Lele12g0663 458 CDD OsENODL1_like 92 188 IPR041846 -
Lele12g0663 458 Pfam Plastocyanin-like domain 102 185 IPR003245 GO:0009055
Lele12g0663 458 PRINTS Proline rich extensin signature 262 287 - -
Lele12g0663 458 PRINTS Proline rich extensin signature 195 216 - -
Lele12g0663 458 PRINTS Proline rich extensin signature 242 259 - -
Lele12g0663 458 PRINTS Proline rich extensin signature 225 241 - -
Lele12g0663 458 ProSiteProfiles Phytocyanin domain profile. 92 193 IPR003245 GO:0009055
Lele12g0663 458 SUPERFAMILY Cupredoxins 90 192 IPR008972 -
Lele12g0663 458 MobiDBLite consensus disorder prediction 222 275 - -
Lele12g0663 458 MobiDBLite consensus disorder prediction 196 425 - -
Lele12g0663 458 MobiDBLite consensus disorder prediction 294 354 - -
Lele12g0663 458 FunFam Early nodulin-like protein 1 91 196 - -
Lele12g0663 458 Gene3D - 90 197 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0663 Lele-ChrLele12 14926413 14928005 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0663 77 230 Phytocyanin Superfamily AT4G27520 56.688 4.60e-53 180
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0663 12 14926413 14928005 Lele12g0663 12 14926413 14928005 ECH
Lele09g0662 09 5026975 5028278 Lele12g0663 12 14926413 14928005 hybridization
Lele10g0606 10 4463265 4464848 Lele12g0663 12 14926413 14928005 hybridization