Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0632 ATGAATCGGCATAAACACGTAGACGGTGAAATCCGCTCTTTGATCCTCACTACCATTTCTGCCATATGCTTTTCTTTTATAAAAGGGACGACAATTGAAGAGTTTAGCTTGAAATCGAAAGAGCATCAAATTGGAGGAAGAAGAAGAAGAAGCAAAGCAAGAACTAGATTGGAGCAGAAGTTGACAGAAATGGAGGCTCAGACTAAGTTCAAAGCTCCTGCTGATAGCTTTCAGAAGAGGAACAATCTTCCTCTTACTCTTAAGTTTGAGGATGTGGTGTGCAAGATTCAGACGAAGAAAAGTGGATTATTCAACAAGAACACAAAATCAGAAGAGAAAGTGATACTAAAAGGAGTGTCAGGGATAGTGGAACCAGGAGAAATGCTAGCAATGCTAGGACCATCAGGAAGTGGCAAGACAACACTCCTTAATGCATTTGTAAGCAGACTCAAAAGCAACACCAAACTCCAAGGAACTATAACTTACAACAACAGACCATTCTCAAACACGACCAAGAGAAACATCGGATTCGTCACGCAAGATGACATTCTCTACCCACACTTAACTGTCACTGAAACCTTAGTCTTCACAGCTCTTCTCAGACTACCAAACACCCTCACCAAAAAAGAGAAAATCTCACAGGCAGAAAATGTGATATCCCAACTAGGGCTAACCAAGTGTAAGGATAGCATAATAGGAGGATCATTGGTAAGAGGAGTTTCAGGAGGAGAGAGGAAGAGGGTTAGTATTGGTCAAGAGATGTTGGTAAACCCTAGCTTGTTGTTTTTGGACGAGCCAACTTCCGGACTCGACTCAACCACGGCTCAGAGGATCGTGTCCACTTTGTGGGAGATGGCTAATGCTGGAAGGACTGTGGTTATGACCATACACCAACCTTCAAGCAGATTGTTCTGCATGTTTTGTAAGGTTTTGTTGTTGTCTGAAGGAAGCCCTTTGTTCTTTGGGAAGGGTTCTGATGCATGGAACTATTTTCTGAGCCTTGGATGTGCCCCTACTTTAGGCATGAACCCTTCTGATTTCCTTTTGGATCTAGCAAATGGTATTTATACTGATGAAACTTGTGAAGATCATGCTTCACTTAAGCAGACGTTGGTGTTAGCATACAAGCATAACCTTGAAGCACAAGTGAAGGAAATGGTTCATTCTGTAAGTGATTTTGATAAAAGTGAAAGCAGATTTCAAGGAAGAGAGTTAGATAAATGGTCTACAACTTGGTTTCAGCAGTTCAGGGTGTTGCTCAAAAGAGGAGTTAAGGAGAGAAGACATGAATCATTCTCTGGCCTCAAAGTTACTCAAATCATTATGGTTGCCATTATTTCAGGACTTCTATGGTTTAAATCTGACATTTCTCACTTGCAGGATCAAATTGGTCTCCATTTCTTCATAGTAAGCTTCTGGAGTTTCTTCCCAATGTATCAAGCCATCTTTGCATTCCCACAAGAAAGGACAATGCTTGAGAAAGAAAGATCCTCCGGAATGTACCGGCTTTCCTCGTACTTCCTCTCGAGGATTGTAGCAGACCTACCCATGGAACTTGTCCTTCCAACAGTTTTTCTCATCATAACCTACTGGATGGCAGGCCTCAAACCACATGCCCTGAACTTCTTATACGCACTCTTCAGTCTCTTACTCAATGTTCTTGTCTCCCAAGGACTAGGCCTCGCGCTTGGCGCCATTTTAATGGATCAGAACTCTGCAAGTACACTTGGCTCTGTGGTTATGCTGAGTCTTATGTTATCTGGTGGATTCTTTGTCCAACATATCCCAAAATTTATAGGTTGGATCAAGTACTTTTCCATCAGCTACTACTCATATGAATTGTTTGTGGGGTCTCAGTATGAGAGTAAGGACACTTACCCTTGTTCGGAAGGGCATTGTTTGGTTGCAGAATTTCCTTCCATAAAGCAAATAGGGCTGCGTTCAGGGGACCAAGTGATTGCTGCCTTGGCTCTGGTGATAATGCTAATTGGTTTCAGTCTCATAGCTTATTTAGCTCTAATGAGGATTGGGGTCGCTAAGAAACTTGCCTAG 2052 0.4225 MNRHKHVDGEIRSLILTTISAICFSFIKGTTIEEFSLKSKEHQIGGRRRRSKARTRLEQKLTEMEAQTKFKAPADSFQKRNNLPLTLKFEDVVCKIQTKKSGLFNKNTKSEEKVILKGVSGIVEPGEMLAMLGPSGSGKTTLLNAFVSRLKSNTKLQGTITYNNRPFSNTTKRNIGFVTQDDILYPHLTVTETLVFTALLRLPNTLTKKEKISQAENVISQLGLTKCKDSIIGGSLVRGVSGGERKRVSIGQEMLVNPSLLFLDEPTSGLDSTTAQRIVSTLWEMANAGRTVVMTIHQPSSRLFCMFCKVLLLSEGSPLFFGKGSDAWNYFLSLGCAPTLGMNPSDFLLDLANGIYTDETCEDHASLKQTLVLAYKHNLEAQVKEMVHSVSDFDKSESRFQGRELDKWSTTWFQQFRVLLKRGVKERRHESFSGLKVTQIIMVAIISGLLWFKSDISHLQDQIGLHFFIVSFWSFFPMYQAIFAFPQERTMLEKERSSGMYRLSSYFLSRIVADLPMELVLPTVFLIITYWMAGLKPHALNFLYALFSLLLNVLVSQGLGLALGAILMDQNSASTLGSVVMLSLMLSGGFFVQHIPKFIGWIKYFSISYYSYELFVGSQYESKDTYPCSEGHCLVAEFPSIKQIGLRSGDQVIAALALVIMLIGFSLIAYLALMRIGVAKKLA 683
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0632 683 Pfam ABC transporter 116 268 IPR003439 GO:0005524
Lele12g0632 683 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 55 669 - -
Lele12g0632 683 Gene3D - 103 330 IPR027417 -
Lele12g0632 683 SMART AAA_5 125 317 IPR003593 -
Lele12g0632 683 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 87 340 IPR003439 GO:0005524
Lele12g0632 683 FunFam ABC transporter G family member 22 103 334 - -
Lele12g0632 683 Pfam ABC-2 type transporter 297 398 IPR043926 GO:0140359
Lele12g0632 683 Pfam ABC-2 type transporter 414 620 IPR013525 GO:0016020|GO:0140359
Lele12g0632 683 ProSitePatterns ABC transporters family signature. 240 254 IPR017871 GO:0005524|GO:0016887
Lele12g0632 683 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 111 331 IPR027417 -
Lele12g0632 683 Coils Coil 47 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0632 Lele-ChrLele12 14694827 14697377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0632 123 301 Calmodulin-binding Proteins AT2G36910 27.513 1.20e-10 63.2