Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0630 ATGGAGAGCACCGACTCATCCACCGGTTCCCAACAACCGAACCTGCCGCCCGGTTTCCGGTTCCACCCCACCGACGAGGAGCTCGTCGTTCACTACCTCAAGAAGAAGGTCTCCTCCGCTCCCCTCCCCGTCGCCATCATCGCCGAGGTCGACCTCTACAAGTTCGACCCCTGGGAACTCCCTGCTAAGGCCGCGTTTGGGGAGCAAGAATGGTACTTCTTCAGCCCAAGGGACAGGAAGTACCCGAACGGAGCGCGGCCAAACAGGGCAGCCACATCTGGGTATTGGAAGGCGACGGGGACGGATAAGCCGGTGCTCACATCTAACGGAAACCAGAAGTTGGGAGTGAAGAAAGCTTTGGTCTTTTACGGAGGGAAACCCCCAAGAGGAATCAAAACCAATTGGATCATGCATGAATATCGCCTCGTTGATAATAAGCCTAACAATAAGCCTCCTGGTTGTGACTTAGGCAACAAGAAAAACTCCCTACGGCTGGACGACTGGGTGCTGTGCCGAATCTACAAGAAGACCAACACACAGAGATCGGCTTTGGATCATGAAAGGGACGATTCAATGGATGATATGATTGGGATCGGAGGGGTGCCTCCTTCGATCAACGTGGGCCAAATGAATGCGAGGTTTCACCTTTCCAAGATGTCCACATTGAGCTGTGGTGGAACCGCATTAATGGAGAATCATCCTCATCATCATCATCATGACCAGAACTTGCTGGAAGGGGTTATATCCAGCAGCAACAAGGGATCAGATCTTCAACTTCCCTTTATGCCAACCATGACTGCTTCCACTGCCTCTAATTCAAACACGAAACGAACACTGTCGTCGCTGTATTGGCCGAGCAATAACAATGAAGATGACGACGAGAATGGCACGAAGAGGTTGGATTTGGATGAATATCATCGTCATCACCATAGTAATAATAACGAGTTTGGCAGTAACTCCATAGCCACCTTGCTTAACCAGATTCCTCAGACTCCTTCATTGCACCACCAGACAATGCTTAGCTCATACGCATATTCGATACCAGGAATGAATTGGTACGCTTGA 1065 0.5042 MESTDSSTGSQQPNLPPGFRFHPTDEELVVHYLKKKVSSAPLPVAIIAEVDLYKFDPWELPAKAAFGEQEWYFFSPRDRKYPNGARPNRAATSGYWKATGTDKPVLTSNGNQKLGVKKALVFYGGKPPRGIKTNWIMHEYRLVDNKPNNKPPGCDLGNKKNSLRLDDWVLCRIYKKTNTQRSALDHERDDSMDDMIGIGGVPPSINVGQMNARFHLSKMSTLSCGGTALMENHPHHHHHDQNLLEGVISSSNKGSDLQLPFMPTMTASTASNSNTKRTLSSLYWPSNNNEDDDENGTKRLDLDEYHRHHHSNNNEFGSNSIATLLNQIPQTPSLHHQTMLSSYAYSIPGMNWYA 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0630 354 FunFam NAC transcription factor 56 24 181 - -
Lele12g0630 354 ProSiteProfiles NAC domain profile. 15 176 IPR003441 GO:0003677|GO:0006355
Lele12g0630 354 MobiDBLite consensus disorder prediction 1 17 - -
Lele12g0630 354 ProSitePatterns EF-hand calcium-binding domain. 293 305 IPR018247 -
Lele12g0630 354 Pfam No apical meristem (NAM) protein 16 142 IPR003441 GO:0003677|GO:0006355
Lele12g0630 354 PANTHER NAC TRANSCRIPTION FACTOR 56 15 235 - -
Lele12g0630 354 SUPERFAMILY NAC domain 7 176 IPR036093 GO:0003677|GO:0006355
Lele12g0630 354 MobiDBLite consensus disorder prediction 1 20 - -
Lele12g0630 354 Gene3D NAC domain 24 181 IPR036093 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0630 Lele-ChrLele12 14655858 14657309 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0630 1 354 NAC Transcription Factor Family AT3G15510 52.011 1.18e-121 353
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Lele12g0630 NAM 6.1e-40 No_clan