Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0615 ATGATGTTGTCGCCCACTCCTTCAGCGATAGCGAGGAGCTCGCTAGAAGAAATGCTTGAATCAATCCGGCGGAGGGGAGAAGAAGAGAAGCCAAAGGACTTGCCGCCAGCATTACCGTCTCGTCCGACGTCAAGGGCTCGGCTTCCTTCAGCTAGACGGTCGTTGCCGAGTAAATTTAGGTTTGAAGGTGATCAGGATGCAACAACAAGCTCCCAGGATAATTCCAATGCAGATGCTAAAGAAGAGATCAAGAAGAAAGAAGGGGAAGTGGGACAGAAGAGAAAAGGAAGTTTTGCGAGCAAGAAGATGAAGCAAGACACGGAATCGCCTTATATCGTGACATCGGAAGAGAATATAAGCCAACCGGCGTCAGAAGACCCTGTTTCAGCATCTACTGCTTCCATAGCAACATTGGGGAAGATTCACGAATTGGATGGTGATGATAATGTTGCTTATTACGTAAAAAAGAAACTACGTGTTTGGTGTAGGCCGCCAAGTGGAAAGTGGGTACTAGGACATATACAATCAACTTCAGGAGAAGAAGCTTTTGTTTCGCTCTCAGATGGAGATATTATGAAAGTGGCAAGATCAGAGCTTTTACCAGCTAATCCAGATATTCTAGAGGGTGTGGACGATCTTATACAGCTTAGTTACTTACATGAGCCCTCAGTTCTTCATAATCTCCGGTTTAGATATTATCAGGACATGATATACAATAAAGCAGGACCGGTTTTAATTGCCCTCAATCCCTTCAAAGATATCCAGATGTATGGAAATGATTATATCTCGGCTTATAGGCAGAAGACTACGGATAGTCCTCACGTGTATGCCATAGCAGATGTGGCTTTTAATGAGATGATGAGAGATGAAGTAAACCAATCCATTATTATAAGTGGCGAGAGTGGAGCCGGGAAGACAGAGACAGCAAAGTTTGCCATGAAATACTTTGCAGCTCTAAGTGGCAGCAGTTGTGGGATAGAAAAGGAAGTCCTTCAGACAAATTGTATACTAGAAGCTTTTGGGAATGCGAAAACATCTAGGAATGACAACTCCAGCAGATTTGGGAAGTTGATTGAGATTCATTTCAGCACATTGGGGAGGATATGTGGAGCCAAAATCCAAACCTGTAAGCCTGCTCAATCAAGAGTTGTTCAACTGGCAAGCGGTGAGAGGTCGTATCATATCTTTTATCAACTTTGTGCTGGTTCTTCGCCTGATCTTAAAGAGAGACTGAAACTTAAAGCTGCTAGTGAATATAAATATCTAAACCAAAGTGACTGCATGACAATTCATGGTGTTGATGATCCTAAAATGTTTCATAAGCTAATGAAAGCCCTGGATGATGTCAGAATTAGCAAGGAGGATCAAGATCTAGTCTTCAAGGTGGTTGCAGCAATACTGTGGCTGGGAAACATATCATTCCGAGTGACTGACAATGAAAATCACATTGAGGTTGTAGACGATGAAGCTGTTACCAATGCTGCCCTGCTAATGGATTGCAGATCCCAGGATTTAATGGTAACTTTATCTACTCGGAAAATCAAAGCTGGAAAAGATACTATTGCCAAAAAGTTGACATTGTGCCAGGCAACTGACACAAGAGATGGATTGGCAAAGTTCATATATGCAAGCTTGTTTGTCTGGCTTGTAGAACAAATTAACAAGTCACTTGAAGTGGGTAAACGTTGCACTGGGAGATCCATAAGTATTCTTGATATCTATGGGTTTGAGTCATTCCAGAAAAACAGCTTTGAACAGTTCTGTATAAATTATGCCAATGAGAGGCTTCAACAACATTTCAATCGGCATCTGTTTAAACTTGAGCAGGAAGACTATGAATTGGATGGTGTTGATTGGACAAAAGTAGATTTTGAGGACAACCAAGAGTGCTTGGATCTTTTTGAGAAGAAACCTCTGGGGCTGATCTCTCTGTTGGATGAGGAATCAAATTTCCCCAAGGCTACTGATCTAACATTTGCCAACAAACTTAGACAGCACCTGAAAGCTAATCCTTGTTTCAAAAGGGAAAGAGGTGGAGCTTTTCGTGTTCGCCATTATGCGGGGGAGGTTTCGTATGACACAAATGGATTTCTAGAAAAGAACAGAGATCCGCTGCCTCCAGATTCCATTCAACTCCTGTCATCATGTAATTGCCAACTGCTGAAGTTGTTCTCCAAAATGAATGATCAATATAAGCAGTCAAATTCCTCCCACGTAGGCGCATTGGGTTCAAAAAAGCAGAGTGTTGGAACAAAGTTCAAGCTGATGAATCAGTTGGAGGGAACCACACCTCACTTTATTCGCTGCATAAAGCCCAATGATAAGCACCTTGCTGGAACATATGATGAGGACCTTGTCTTACAACAGCTCAGGTGTTGTGGAGTTTTGGAGGTTGTTAGAATTTCAAGGGCTGGATATCCCACTCGAATGATGCATCAAGAGTTTGCCAGAAGGTATGGGTTTTTGCTTTCTGAGGACAGCGTATCTCAGGATCCATTAAGCATCTCAGTTTCTGTTTTACAACAGTTTAATATCCCTCCTGAAATGTACCAAGTCGGCTACACAAAACTGTATCTCCGAACAGGGCAGATTGGTGTCCTGGAGGATAGGAGGAGACAGATTATAGTGGGAATACTCGGGGTTCAAAAATGGTTACGTGGTCATCAAGCTCGCCGAAACTTTAAAGTCCTCAAGAATGGAGCAACAGCCTTACAATCAATTGTTCGTGGAGAGATTGCGAGAAAGGCATATCAGGCAAAGAAGTCTGCTGCATCTGTTGCAGCTGAAAAGCTTCAGCAGGCCCAGGCAATCACACGTTTACAATCTGTGATCCGGGGGTGGTTGGTTCGAAGGCGTGCTGGGAGTCTCATTCATAAGTTGAAGAAAGATGTTAAAAACGCTAAACATAAGCATAAGTCACGTTCTAAGATGTCAGAAATTAAGGATTTGTCCAAAGAGCAGGTTCATAATCTGCCATCAACTTTGGTAGAGCTCCAGAATCGGGCTGCCAAAGCTGAAGCAACTGTGAAGCAAAAGGAAGAGGAAAATACTGCATTGAGGGAACAACTAAAACAATTTGAGACTAGGTGGATTGAGTATGAGATGAAGATGAAATCAATGGAACAGATGTGGCAAAAACAGATGACATCTTTGCAAAAGAGTCTTTCTGTTGCTAAGAAGAGCCTTGCAGCCGAGAATTCCACTGATCAACCTGGAAGATATGATGCTATGTCACCTGGCTTCTATGACTCAGAAGATGCTACTTCCATGGAATCTAGAACCCCCGCGGGCAGCACGCCTATCAAGTTTCCTAGCACTCCTTATGAGAATGGAGCAAGGAGAGAAGCTAAAGATACTTTCAATGCAGTCAGCAATCTCATGAAAGAATTCGAGCAGCGGAAACAGACTTTTGATGATGATGCCAAAGCTATACTTGCAATCAAATCAGGGCATCCTGCTCACACGAATTCCAACGAAGAACTTCGGCAGCTTAAACGCCGATTTCAAGGATGGAAGAAAGAGTACAAGGCACAATTACGGGAAACAAAAGCTAGGCTTTCTAAGAGTCCAGAAGCCGAAATTAGTTGTCAAAAGTGGTGGGGGAAGATAAGCTCAAGAGGACAATAG 3627 0.4285 MMLSPTPSAIARSSLEEMLESIRRRGEEEKPKDLPPALPSRPTSRARLPSARRSLPSKFRFEGDQDATTSSQDNSNADAKEEIKKKEGEVGQKRKGSFASKKMKQDTESPYIVTSEENISQPASEDPVSASTASIATLGKIHELDGDDNVAYYVKKKLRVWCRPPSGKWVLGHIQSTSGEEAFVSLSDGDIMKVARSELLPANPDILEGVDDLIQLSYLHEPSVLHNLRFRYYQDMIYNKAGPVLIALNPFKDIQMYGNDYISAYRQKTTDSPHVYAIADVAFNEMMRDEVNQSIIISGESGAGKTETAKFAMKYFAALSGSSCGIEKEVLQTNCILEAFGNAKTSRNDNSSRFGKLIEIHFSTLGRICGAKIQTCKPAQSRVVQLASGERSYHIFYQLCAGSSPDLKERLKLKAASEYKYLNQSDCMTIHGVDDPKMFHKLMKALDDVRISKEDQDLVFKVVAAILWLGNISFRVTDNENHIEVVDDEAVTNAALLMDCRSQDLMVTLSTRKIKAGKDTIAKKLTLCQATDTRDGLAKFIYASLFVWLVEQINKSLEVGKRCTGRSISILDIYGFESFQKNSFEQFCINYANERLQQHFNRHLFKLEQEDYELDGVDWTKVDFEDNQECLDLFEKKPLGLISLLDEESNFPKATDLTFANKLRQHLKANPCFKRERGGAFRVRHYAGEVSYDTNGFLEKNRDPLPPDSIQLLSSCNCQLLKLFSKMNDQYKQSNSSHVGALGSKKQSVGTKFKLMNQLEGTTPHFIRCIKPNDKHLAGTYDEDLVLQQLRCCGVLEVVRISRAGYPTRMMHQEFARRYGFLLSEDSVSQDPLSISVSVLQQFNIPPEMYQVGYTKLYLRTGQIGVLEDRRRQIIVGILGVQKWLRGHQARRNFKVLKNGATALQSIVRGEIARKAYQAKKSAASVAAEKLQQAQAITRLQSVIRGWLVRRRAGSLIHKLKKDVKNAKHKHKSRSKMSEIKDLSKEQVHNLPSTLVELQNRAAKAEATVKQKEEENTALREQLKQFETRWIEYEMKMKSMEQMWQKQMTSLQKSLSVAKKSLAAENSTDQPGRYDAMSPGFYDSEDATSMESRTPAGSTPIKFPSTPYENGARREAKDTFNAVSNLMKEFEQRKQTFDDDAKAILAIKSGHPAHTNSNEELRQLKRRFQGWKKEYKAQLRETKARLSKSPEAEISCQKWWGKISSRGQ 1208
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0615 1208 ProSiteProfiles Myosin motor domain profile. 208 872 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0615 1208 FunFam Myosin heavy chain 391 447 - -
Lele12g0615 1208 FunFam Myosin IE heavy chain 448 556 - -
Lele12g0615 1208 MobiDBLite consensus disorder prediction 1 128 - -
Lele12g0615 1208 SMART iq_5 932 954 IPR000048 GO:0005515
Lele12g0615 1208 SMART iq_5 896 918 IPR000048 GO:0005515
Lele12g0615 1208 SMART iq_5 873 895 IPR000048 GO:0005515
Lele12g0615 1208 SMART MYSc_2a 202 873 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0615 1208 MobiDBLite consensus disorder prediction 17 35 - -
Lele12g0615 1208 Gene3D Myosin VI head, motor domain, U50 subdomain 448 556 - -
Lele12g0615 1208 Gene3D Kinesin motor domain 207 805 IPR036961 -
Lele12g0615 1208 MobiDBLite consensus disorder prediction 1063 1113 - -
Lele12g0615 1208 MobiDBLite consensus disorder prediction 77 102 - -
Lele12g0615 1208 Pfam Myosin head (motor domain) 210 860 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0615 1208 Gene3D - 579 762 - -
Lele12g0615 1208 Gene3D - 391 447 - -
Lele12g0615 1208 CDD MYSc_Myo8 222 860 IPR036022 -
Lele12g0615 1208 MobiDBLite consensus disorder prediction 103 128 - -
Lele12g0615 1208 Coils Coil 1113 1133 - -
Lele12g0615 1208 ProSiteProfiles IQ motif profile. 897 925 IPR000048 GO:0005515
Lele12g0615 1208 PANTHER MYOSIN 201 1195 - -
Lele12g0615 1208 Gene3D - 878 926 - -
Lele12g0615 1208 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 160 925 IPR027417 -
Lele12g0615 1208 MobiDBLite consensus disorder prediction 1085 1105 - -
Lele12g0615 1208 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 155 204 IPR004009 GO:0003774|GO:0005524|GO:0016459
Lele12g0615 1208 FunFam Unconventional myosin-XIX 579 762 - -
Lele12g0615 1208 Gene3D - 806 873 - -
Lele12g0615 1208 Pfam IQ calmodulin-binding motif 935 952 IPR000048 GO:0005515
Lele12g0615 1208 Pfam IQ calmodulin-binding motif 880 895 IPR000048 GO:0005515
Lele12g0615 1208 Pfam IQ calmodulin-binding motif 901 918 IPR000048 GO:0005515
Lele12g0615 1208 PRINTS Myosin heavy chain signature 238 257 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0615 1208 PRINTS Myosin heavy chain signature 620 648 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0615 1208 PRINTS Myosin heavy chain signature 335 362 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0615 1208 PRINTS Myosin heavy chain signature 292 317 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0615 1208 PRINTS Myosin heavy chain signature 567 595 IPR001609 GO:0003774|GO:0005524|GO:0016459
Lele12g0615 1208 Coils Coil 995 1029 - -
Lele12g0615 1208 ProSiteProfiles IQ motif profile. 877 903 IPR000048 GO:0005515
Lele12g0615 1208 ProSiteProfiles IQ motif profile. 933 962 IPR000048 GO:0005515
Lele12g0615 1208 Coils Coil 1154 1181 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0615 Lele-ChrLele12 14541513 14551705 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0615 1 1202 Myosins gene family AT5G54280 61.309 0.0 1519