Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0614 ATGGCCCCTTCAGAGCTGGACAGCTCACGTGCTTCACTCGTGCACGATAGCCACCACACAACAGATGACGACGAGGATTACAGCATCACAGACAGCACGGAGGAGGAGACGGATGAAGAAGAAGACACCAACGGAACAGGCGACAGCGACAAGGCGTTCGGGCGGTGCTGGCGGAGGAAAGGTGTTACCGGAGGATGCGGTTACGGCGGGAAGGTGTTGGACCCGAGGGCCAAGTGGGTTCAAGAATGGAACAGGGTGTTCTTACTGGGGTGTGCTATGGGGTTGTTCGTGGACCCACTCTTCTTCTACGCCCTATCAGTGAACGACACGTGCATGTGCCTCTTCGTCGACGGCTGGTTCGCAGTCACCGTCACAGCCCTCCGCTGCATGACGGACGCCTTGCACCTATGGAACATGTGGCTACAGTTCAAAATGGGCAAACGGCACTTCGGAAGTGGCCTTGCCGTCCCTACAAACCGTCGCTTGGCGGCTCTCCAGTATCTCAAAGTCAAGACCGGCTTCTTCTTCGACCTCTTCGTCATCCTCCCTCTACCACAGATAGTGCTGTGGGTTACAATACCGTATCTGCTGGAGAAAGGGTCAGTGACATTGGTGATGACGGTGTTCTTCATAATGTTTCTGTTTCAATATCTTCCAAAGATATATCACTCTGTTTGCCTCTTGCGACGCTTGCAAAACCTCTCCGGCTACATCTTCGGCACTGTTTGGTGGGGCATTGCCCTTAACATGATCGCCTATTTCGTCGCCTCCCATGCTGCAGGGGCATGCTGGTACTTGCTAGGGATTCAGAGGGCAGCAAAGTGTCTGAGAGAGCAATGTGGGAGAACAAATGGGTGTGGTTTAAGGATACTGTCTTGTAAGGAACCAATATATTATGGAACTAGTGGGATGGTTAGGGACAGAGCAAGACTAGCATGGGCAGAGAACAGGCAAGTCAGGTCGACGTGCTTGGATAGCTCTGAAAACTACAACTATGGAGCTTATAAATGGACCGTTCAGCTCGTCACCAACGATAACAGACTCGAAAAGATACTCTTCCCTATCTTTTGGGGTCTTATGACTCTCAGCACTTTCGGGAACCTAGAGAGCACCACAGAATGGCTAGAAGTGGTGTTCAACATCATTGTTTTGACCAGTGGACTTATTCTCGTCACCATGTTGATTGGAAACATTAAGGTGTTTCTGCATGCAACCACATCAAAGAAGCAAGCGATGCAACTGAAGATGAGGAACATAGAATGGTGGATGAGGAAGAGGCACCTTCCTTCTGACTACAGGCAGCGCGTGCGTAACTATGAACGGCAGCGATGGGCGGCGACACGTGGAGTCGACGAATTCGAGATGATCAGAAACCTGCCGGAGGGTCTCCGGAGAGACATCAAGTACCATCTCTGCTTGGACTTGGTCCGACAGGTTCCATTATTTCAGCACATGGATGAACTGGTGCTAGAGAACATATGCGACCGCGTGAAGTCACTCATATTCACGAAGGGAGAAACAATAACCAGAGAGGGGGATCCAGTTCAGAGAATGTTGTTCGTGGTGAGGGGTCATCTACAGAGCAGTCAAGTTCTGAGAGACGGCGTGAAAAGTTACTGCATGTTAGGCCCAGGGAACTTCAGCGGCGACGAGCTTCTCTCGTGGTGTCTTAGGAGGCCGTTCATAGAGCGGCTGCCACCTTCGTCATCGACGCTCATAACACTGGAAACGACGGAGGCATTTGGGCTGGAAGCGGAGGACGTGAAGTACGTCACGCAGCACTTCAGATACACGTTCATGAACGAGAAGGTGAAGAGGAGCGCCAGGTATTACTCGCCAGGATGGAGAACTTGGGCTGCCGTCGCCATACAGCTGGCGTGGCGGAGGCACAAGCATCGTTTGACGTTGGCGTCGTTGTCGTTCATAAGGCCTCGAAGGCCAGTGTCTCGGTGCTCTTCCCTCGGAGAAGACAGGCTTCGACTCTACACGGCCTTGTTGACCTCACCAAAGCCTAATCAGGATGATTTTGACTATTGA 2037 0.5194 MAPSELDSSRASLVHDSHHTTDDDEDYSITDSTEEETDEEEDTNGTGDSDKAFGRCWRRKGVTGGCGYGGKVLDPRAKWVQEWNRVFLLGCAMGLFVDPLFFYALSVNDTCMCLFVDGWFAVTVTALRCMTDALHLWNMWLQFKMGKRHFGSGLAVPTNRRLAALQYLKVKTGFFFDLFVILPLPQIVLWVTIPYLLEKGSVTLVMTVFFIMFLFQYLPKIYHSVCLLRRLQNLSGYIFGTVWWGIALNMIAYFVASHAAGACWYLLGIQRAAKCLREQCGRTNGCGLRILSCKEPIYYGTSGMVRDRARLAWAENRQVRSTCLDSSENYNYGAYKWTVQLVTNDNRLEKILFPIFWGLMTLSTFGNLESTTEWLEVVFNIIVLTSGLILVTMLIGNIKVFLHATTSKKQAMQLKMRNIEWWMRKRHLPSDYRQRVRNYERQRWAATRGVDEFEMIRNLPEGLRRDIKYHLCLDLVRQVPLFQHMDELVLENICDRVKSLIFTKGETITREGDPVQRMLFVVRGHLQSSQVLRDGVKSYCMLGPGNFSGDELLSWCLRRPFIERLPPSSSTLITLETTEAFGLEAEDVKYVTQHFRYTFMNEKVKRSARYYSPGWRTWAAVAIQLAWRRHKHRLTLASLSFIRPRRPVSRCSSLGEDRLRLYTALLTSPKPNQDDFDY 678
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0614 678 Pfam Cyclic nucleotide-binding domain 502 589 IPR000595 -
Lele12g0614 678 MobiDBLite consensus disorder prediction 27 45 - -
Lele12g0614 678 MobiDBLite consensus disorder prediction 11 26 - -
Lele12g0614 678 SUPERFAMILY Voltage-gated potassium channels 75 402 - -
Lele12g0614 678 FunFam Cyclic nucleotide-gated ion channel 1 408 472 - -
Lele12g0614 678 FunFam cyclic nucleotide-gated ion channel 4 479 597 - -
Lele12g0614 678 Gene3D Helix hairpin bin 406 472 - -
Lele12g0614 678 SUPERFAMILY cAMP-binding domain-like 407 595 IPR018490 -
Lele12g0614 678 Pfam Ion transport protein 83 398 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele12g0614 678 MobiDBLite consensus disorder prediction 1 49 - -
Lele12g0614 678 CDD CAP_ED 481 587 IPR000595 -
Lele12g0614 678 Gene3D Jelly Rolls 479 597 IPR014710 -
Lele12g0614 678 ProSiteProfiles cAMP/cGMP binding motif profile. 481 591 IPR000595 -
Lele12g0614 678 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 51 643 - -
Lele12g0614 678 SMART cnmp_10 481 610 IPR000595 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0614 Lele-ChrLele12 14525212 14530678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0614 70 677 Ion Channels AT5G54250 80.551 0.0 1021