Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0603 ATGATACTAAACTTAATTCTCAATTCGATCCTGAGTTTGATGTGTCTTTCCTTACAGTCCACGGATGCAATCAAGTACAAAGAAACGTTGGGGATGGGCCAATTACTTGGAACCTCAGATACCTTGGTCTCTGCTAACGGCAACTTCGAACTGGGGTTTTTCGCTCGAGAGAATTCCACCAAGTACTACGTGGGTATGTGGTTTAAGAAAGTTCCTAAAGACAACATCGTTTGGGTTGCAAATAGAAAGCTCGCAGCCAGCGATTCCAATGCCGTTCTCACTGTTAGTGACAATGGAAATCTCGTAGTCAAGAATGATGGAATGGTATACTTCGTCACCAACATTTCCGACATCAGCAGTACCCATGCTATGCTCTTGGATTCTGGTAATCTCCTCCTCATGAACAGCTCCAACTTGAACATTCTTTGGCAAAGTTTCGACAATCCTACAAATACCCTTTTGCCTGGAATGAAGGTAGGATTTGACGCTGGAATCAGCTTGTCGTTGACATCGTGGACAAGTGTAGAAGACCCAAGTCCTGGAAATTTTTCTCTTGAAGTTGACGTGGCTATGGAGAACGCGAGGTTAATCATCATGAGGGAATCCGAGATATATTGGATTGGTGATGAGCTATCAAATTTCACGTTTCAAAGTATTGATAATCGAGACCCTGCTATATGGGACACGGTCTATTCCTATTTAACTTGGCAAGGGGGCTATACTTCTCAATTGGTTCTTGAAGTTTCTGGGGAGCTTAACCAGAAATTTTGGTCACAAGATTCCATGCAATGGGTTTCTCTGCAGTCATCCAAGTGCGGTAGAAACGCAACCTGCGGAAATTTTGGCATCTGTAACCCACAAGCCACTGATCCCTGTGAGTGTCTCCGAGGATTTATGCCGTACGATGAAGACTCTTGGAACAAGGGGGACACATCCGCAGGTTGTGTGAGAAAAACAGAGTTGCTCTGCAGAAATGGGAGCAGTGATGGATTGGGTGACGGGTTTTTACTAGTAGATAGAGTGGATTTTTCTTCTGATAGTTCGATTTCCTTCACAACTGACAACGCGTTCGCGTGTCGAAGAGGTTGCTCAATCAATTGTTCTTGCGTAGCTTATTCTTACGATGTTACTGGTCGTTGTTTGTTCTGGCTTAACAGAGTGTTGAATCTGAAGAACATCTCGGTTGACGTTAGAGATGATAATTCTAGACCAAGTTTCTTTCTCAAACTGGCTCACACTGACTTGCTGATTAACAATGTGCCGAGTAATCCAGATCATAAGTCGAATCAAAGCCGGAAGACGTTAGTAACAGTTGTAATAGTTATCATATTTGTTGCATTGCTTATATCTGCTCTATTTGCTTACTGCTGCTGGAGGAGAAAGCTTAGGGGACAAGGGGAGGATCTGCTATTGTTTGATCCAAGCATGAGCATGAAAGTTGAGATTTCAGAGCTTAGTGATGTCGATAAGGTTGGAAAAGTGAACAAGAGGGATGTCAAATTGCCAATGTTTAGTTTTGCAAGTGTTTCTGCAGCAACTAATAACTTTTCATCTGAAAATAAGCTTGGTGAGGGTGGCTTTGGACCCGTTTATAAGGGTAAGCTGTTGAATGGGGACGAGGTTGCTGTGAAAAGGCTATCAGCAAGATCTGGTCAAGGATGGGAGGAGTTGAAAAATGAGGCATTGCTCATTGCAAAACTCCAACACAACAACCTTGTCAGGCTTTTGGGTTGCTGCGTGGAACGTGATGAAAAGATGCTTATTTATGAATTCATGCCAAACAAAAGCTTGGATGTTTTCCTTTTTGATGCAACAAAACGCGGGATTTTAGATTGGAAAACCCGAGTCCGAATAATTGATGGAATTGCCCAAGGTCTTCTTTATCTACACCAATATTCTAGGTTTCGAATCATTCACAGAGATTTAAAAGTTAGTAATATTTTGCTGGACATCGATATGAATCCTAAAATATCAGATTTCGGAATGGCAAGACTATTTGGTGGAAATGAATTACAGGCAAATACAAATCGGATAGTTGGCACTTATGGTTATATGTCTCCTGAATACGCATTAGAAGGTATTTTCTCGATAAAATCAGACGTATTCAGCTTTGGAGTCCTTTTGCTAGAGATAATAAGTGGCAAAAAGAATACTGGTCTGTATAACACAAACTCCCTCAATCTTCTTGGATATGCATGGGACCTATGGAATAGTGGGAGAGGAACAGAGCTGATGGATTCAGAGTTAGAAGACGCATCCATAAATAAAATTGTGGTGAGAAGATATGTGAACATAGCACTGCTTTGCGTACAAGAAAGCGCAGAAGACAGACCAACCATGGCTGATGTTGTTTCGATGCTTGGGAATGAGAATATGGTACTGCCGTTTCCAAAGCCCATAGCTTTCCTTAATGTAAGAGGCATCACAAGGACTTCAAGATCAGACGGAAGCTCATCGGCAGAAAATGTGTCTATCAATAACATGACTGCTTCTGTTATGGAAGCAAGATGA 2511 0.4186 MILNLILNSILSLMCLSLQSTDAIKYKETLGMGQLLGTSDTLVSANGNFELGFFARENSTKYYVGMWFKKVPKDNIVWVANRKLAASDSNAVLTVSDNGNLVVKNDGMVYFVTNISDISSTHAMLLDSGNLLLMNSSNLNILWQSFDNPTNTLLPGMKVGFDAGISLSLTSWTSVEDPSPGNFSLEVDVAMENARLIIMRESEIYWIGDELSNFTFQSIDNRDPAIWDTVYSYLTWQGGYTSQLVLEVSGELNQKFWSQDSMQWVSLQSSKCGRNATCGNFGICNPQATDPCECLRGFMPYDEDSWNKGDTSAGCVRKTELLCRNGSSDGLGDGFLLVDRVDFSSDSSISFTTDNAFACRRGCSINCSCVAYSYDVTGRCLFWLNRVLNLKNISVDVRDDNSRPSFFLKLAHTDLLINNVPSNPDHKSNQSRKTLVTVVIVIIFVALLISALFAYCCWRRKLRGQGEDLLLFDPSMSMKVEISELSDVDKVGKVNKRDVKLPMFSFASVSAATNNFSSENKLGEGGFGPVYKGKLLNGDEVAVKRLSARSGQGWEELKNEALLIAKLQHNNLVRLLGCCVERDEKMLIYEFMPNKSLDVFLFDATKRGILDWKTRVRIIDGIAQGLLYLHQYSRFRIIHRDLKVSNILLDIDMNPKISDFGMARLFGGNELQANTNRIVGTYGYMSPEYALEGIFSIKSDVFSFGVLLLEIISGKKNTGLYNTNSLNLLGYAWDLWNSGRGTELMDSELEDASINKIVVRRYVNIALLCVQESAEDRPTMADVVSMLGNENMVLPFPKPIAFLNVRGITRTSRSDGSSSAENVSINNMTASVMEAR 836
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0603 836 ProSiteProfiles PAN/Apple domain profile. 323 411 IPR003609 -
Lele12g0603 836 PIRSF SRK 1 836 IPR024171 GO:0004674
Lele12g0603 836 Gene3D - 22 146 IPR036426 -
Lele12g0603 836 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 114 812 - -
Lele12g0603 836 SUPERFAMILY Protein kinase-like (PK-like) 499 787 IPR011009 -
Lele12g0603 836 Pfam PAN-like domain 332 389 IPR003609 -
Lele12g0603 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 22 146 - -
Lele12g0603 836 SMART blect_4 33 149 IPR001480 -
Lele12g0603 836 Pfam Protein tyrosine and serine/threonine kinase 519 787 IPR001245 GO:0004672|GO:0006468
Lele12g0603 836 Gene3D Transferase(Phosphotransferase) domain 1 592 793 - -
Lele12g0603 836 FunFam Uncharacterized protein 491 591 - -
Lele12g0603 836 ProSiteProfiles Bulb-type lectin domain profile. 27 146 IPR001480 -
Lele12g0603 836 Pfam S-locus glycoprotein domain 228 300 IPR000858 GO:0048544
Lele12g0603 836 SUPERFAMILY alpha-D-mannose-specific plant lectins 76 177 IPR036426 -
Lele12g0603 836 CDD B_lectin 34 149 IPR001480 -
Lele12g0603 836 Pfam D-mannose binding lectin 76 172 IPR001480 -
Lele12g0603 836 CDD STKc_IRAK 522 787 - -
Lele12g0603 836 SMART serkin_6 516 787 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0603 836 ProSitePatterns Serine/Threonine protein kinases active-site signature. 637 649 IPR008271 GO:0004672|GO:0006468
Lele12g0603 836 ProSiteProfiles Protein kinase domain profile. 516 794 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0603 836 Gene3D Phosphorylase Kinase; domain 1 491 591 - -
Lele12g0603 836 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 592 795 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0603 Lele-ChrLele12 14438295 14441380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0603 419 832 Receptor kinase-like Gene Family AT4G05200 48.349 4.11e-121 380
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele12g0603 PK_Tyr_Ser-Thr 4.1e-46 CL0016