Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0601 ATGAAGAATTTTACTGTACTGCCTATTTGCATTGTTTTACTCTTCATAAGAACCTCCACTTCATTAGAAAGTATCACTCGGAGCCAGCATTTAAGAGATGGTGAGACCTTAGTTTCAAGTGAAGGGGTATTTGAGATGGGTTTTTTCTGTCCTGGAAAATCGAAGAACCGATACTTGGGTATATGGTACAAGCGAATTTCTCCTTTGACGGTGGTATGGGTGGCCAATAGAGAAGCACCAATAAGTGATGGCTCAGGAATTTTAGTAGTAAAAGATCAAGGAATTCTTACCCTTTTTGATAGCTCGAATAGAACTGTTTGGTCGTCTAATAGTTCTATAATAGCTGAGAAGCCAATTGTACAGCTCTTAGACACAGGAAATCTTATTATTAGTGACCAAAAACACAGTAATAAGGATCGCTTCATATGGCAGAGTTTTGATTATCCCTGTGATACCTTGTTGCCAGGAATGAAGCTTGGATTTAGCCTAGCCACTGGTCTGAATAGGTTCTTATCTTCTTGGAGAAGTCCAGATGATCCTGGTCAAGGGGAACATATGCTGAAATTAGACCCTCGGGGATATCCACAATCATTTCAATTGAGGACAAATGTCATACATTTCAGAGGAGGATCGTGGAATGGCCTTTATTTTACTGGATATCCAGTTCAAAAACAAAACCCAGTATACAAGGCTAAGTTTGTTTTCAATGATAAAGAGGCATATTATGAATATGAACTCGTGAATAGTTCAGTTTACTCCAGAATTACAATGTCTCCTTCAGGCATTGGGAAACGTGTAGTATGGAGTAATCGAAGAGGCATATGGGAGATTATCTCAGCTAACATGGCAGATCAGTGTGATAATTATGGCTTGTGCGGGGTATATTCTATCTGCGATTTTAGTAGCTCCAGGGTCTGTGAGTGCTTGAAAGGATTTGTACCCAAAAATGAGGAACAATGGAATTTATCAGATTGGTCTGGTGGCTGTGTTCGAAGTGCCCTATTGGATTGTAATAGTTTGGACGGTTTCCGGAAGTATAGAGGTGTGAAATTGCCAGACACATCTTCTTCCCAGTTTAATAAGACCATGAGCCTTGAGGAATGTCAGCAATCATGTTTTAGAAAATGTTCTTGCACAGCATATGCAAATTTGGATATCCGTAACGGAGGTAGTGGCTGCTTACTTTGGTTCAATGATCTGATAGACATTAAGCAATTACCGCGAGGAGGACAAGACATTTTTATTCGTGTCCTCGCTTCAGAGCTAGACTTTTTTGAGAATAAACACTATGGGAACATCAATAAGAGAAATCTCGTAGGAATTGCAGTTGGTTCTGTTACAATAAACATGGGCATGATACTTATAATTTTTGGATTGATTAGATATGTATGGAAAAGGGCACTCAAAAAGTCAGGGATGACAAAAATGTATAATAGGAATCCTTACTACAATAACTTACGAATGGAAGACACAGATCTACAGATATTTGATTTGACAGTCTTATCTAAAGCCACTAATAATTTTTCAAGCACCAATAAATTGGGAGAAGGTGGTTTCGGACCAGTCTACAAGGGTGCTTTGGGAAATGGACAAGAATTAGCGGTGAAAAGGCTATCTCAGAATTCTGTTCAAGGTTTGGAAGAGTTTAAAAATGAAGTTTTGTTGATAGCCAAACTTCAACATCGTAATCTTGTAAAGCTTCTTGGTTGCTGCATTGAAAGAGAAGAAAAATTGTTGATATATGAATACATGCCAAACAAAAGTCTGGACCACTTCATTTTTGATGAAACTAGAAGCAAGTTGTTGGATTGGACAAAGCGTTTCGACATTATTAATGGCATTGCTCGAGGACTTCTCTACCTTCATCAAGATTCTAGATTGAGAGTTATTCATAGAGATTTGAAAACCAGTAATATTTTATTAGACACAAATTTAAATCCAAAAATATCGGACTTTGGCCTAGCTCGTACATTCTGGGGAGATCAAATTGAGGAAAAAACAAACAGGATAGCTGGAACATATGGTTATATGCCTCCTGAATATGCTGTGCACGGACATTTCTCGATAAAATCAGATGTTTTTAGCTTTGGAGTAATAGTCCTAGAGATAATCAGTGGAAAGAAGAATAGAGAATTTTCAGATTTTGAAAACTTCTTGAATCTTCTTGGATATGCATGGAGACTATGGAGAGAAGGAATGGCGTTGGAATTGATCGATGAAGCATTAGGAGAAAGATTCAATCCATCTGAAGTCATACAATGCATACAAGTGGGGCTGTTATGTGTACAACAAAGACCAGAAGATAGACCAGACATGTCGTCTGTGGTTTTAATGCTGAATGGAGAGAAATCATTGCCAGCCCCACATGTTCCTGCTTTCTACATGCAAAGGGAAATACATGAAGCAGATTCTTCCTCGGAAAAATGTAAACCTTCCTCACCAAATGAAATGTCCCTTACAATATTCGAGGCGAGATAG 2478 0.383 MKNFTVLPICIVLLFIRTSTSLESITRSQHLRDGETLVSSEGVFEMGFFCPGKSKNRYLGIWYKRISPLTVVWVANREAPISDGSGILVVKDQGILTLFDSSNRTVWSSNSSIIAEKPIVQLLDTGNLIISDQKHSNKDRFIWQSFDYPCDTLLPGMKLGFSLATGLNRFLSSWRSPDDPGQGEHMLKLDPRGYPQSFQLRTNVIHFRGGSWNGLYFTGYPVQKQNPVYKAKFVFNDKEAYYEYELVNSSVYSRITMSPSGIGKRVVWSNRRGIWEIISANMADQCDNYGLCGVYSICDFSSSRVCECLKGFVPKNEEQWNLSDWSGGCVRSALLDCNSLDGFRKYRGVKLPDTSSSQFNKTMSLEECQQSCFRKCSCTAYANLDIRNGGSGCLLWFNDLIDIKQLPRGGQDIFIRVLASELDFFENKHYGNINKRNLVGIAVGSVTINMGMILIIFGLIRYVWKRALKKSGMTKMYNRNPYYNNLRMEDTDLQIFDLTVLSKATNNFSSTNKLGEGGFGPVYKGALGNGQELAVKRLSQNSVQGLEEFKNEVLLIAKLQHRNLVKLLGCCIEREEKLLIYEYMPNKSLDHFIFDETRSKLLDWTKRFDIINGIARGLLYLHQDSRLRVIHRDLKTSNILLDTNLNPKISDFGLARTFWGDQIEEKTNRIAGTYGYMPPEYAVHGHFSIKSDVFSFGVIVLEIISGKKNREFSDFENFLNLLGYAWRLWREGMALELIDEALGERFNPSEVIQCIQVGLLCVQQRPEDRPDMSSVVLMLNGEKSLPAPHVPAFYMQREIHEADSSSEKCKPSSPNEMSLTIFEAR 825
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0601 825 SUPERFAMILY Protein kinase-like (PK-like) 493 807 IPR011009 -
Lele12g0601 825 CDD B_lectin 28 149 IPR001480 -
Lele12g0601 825 Gene3D Transferase(Phosphotransferase) domain 1 584 787 - -
Lele12g0601 825 CDD PAN_AP_plant 335 417 - -
Lele12g0601 825 Pfam Protein tyrosine and serine/threonine kinase 511 777 IPR001245 GO:0004672|GO:0006468
Lele12g0601 825 SUPERFAMILY alpha-D-mannose-specific plant lectins 71 180 IPR036426 -
Lele12g0601 825 SMART ntp_6 338 417 IPR003609 -
Lele12g0601 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 336 417 - -
Lele12g0601 825 CDD STKc_IRAK 514 781 - -
Lele12g0601 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 584 787 - -
Lele12g0601 825 Gene3D Hepatocyte Growth Factor 335 417 - -
Lele12g0601 825 SMART serkin_6 508 779 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0601 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 473 583 - -
Lele12g0601 825 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 6 766 - -
Lele12g0601 825 Pfam D-mannose binding lectin 70 175 IPR001480 -
Lele12g0601 825 Pfam S-locus glycoprotein domain 207 316 IPR000858 GO:0048544
Lele12g0601 825 ProSiteProfiles PAN/Apple domain profile. 337 418 IPR003609 -
Lele12g0601 825 Gene3D - 18 146 IPR036426 -
Lele12g0601 825 PIRSF SRK 1 825 IPR024171 GO:0004674
Lele12g0601 825 ProSiteProfiles Protein kinase domain profile. 508 785 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0601 825 ProSiteProfiles Bulb-type lectin domain profile. 22 143 IPR001480 -
Lele12g0601 825 SMART blect_4 28 149 IPR001480 -
Lele12g0601 825 Gene3D Phosphorylase Kinase; domain 1 482 583 - -
Lele12g0601 825 Pfam PAN-like domain 337 403 IPR003609 -
Lele12g0601 825 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 17 146 - -
Lele12g0601 825 ProSitePatterns Serine/Threonine protein kinases active-site signature. 629 641 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0601 Lele-ChrLele12 14424345 14427619 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0601 439 794 Receptor kinase-like Gene Family AT4G23190 52.222 8.08e-129 396
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele12g0601 PK_Tyr_Ser-Thr 1.3e-46 CL0016