Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0597 ATGGATACCTTTGCGATTGTTCTTGTTCTTTGTCTTGAAGTATTCTTGGCAGTTTTTTGCGTTGTCGAATCGCAGCTCGTTACTGATGGCATGACCTTAGTTTCTGAAGGTGGAACCTTTGAACTAGGTTTCTTCAGTCCTGGTTCTTCCCAGAAACGTTACCTTGGAGTTTGGTACAAGAACATCCCAATTCAAACTGTCGTTTGGGTCGCCAACCGCAACAATCCGATCAATGATTCCTCTGGTATCTTAACCTTAAACAGCACTGGAAACCTCGTACTCAGCCAAAATGACACAGTCGTTTGGTCTACTACAACCTCTCTGAGAAAACCAGAGAGTCCAGAGGCTCTGCTTTTAGATTCTGGCAATTTAGTGGTAAGAGACAAGAAAGACCCAAACCCAGAAGCCTTTTTGTGGCAAAGCTTCGATTATCCAGGTGATACATTCTTGCCAGGTATGAAATTTGGGTGGGACTTAAGAACTGGTCTAAATAAGAATATAACAGCTTGGAAGAGTCCAGAAGATCCAGCCACAGGGGAATTCTCATGGGGCATGGTTCTTAATAACTATCCTGATGCTTTCATGATGTTGGGTGATCAGAAGTTTTACAGAGCCGGGCCTTGGAATGGCCTGCGTCCTACTGGTTCCCCACAACTAAAGGAAAATCCTCTGTTTCACTTCGAGTTCGTGCAAAACAAGGACGAGGTTTACTTCATGTACAGCCTTAAAAACAAGTATGTGATCTCAAGACAAGTGCTGAACCAAACAATCAAAGCTCGACAACGCTTTGTTTGGTTAGAAGAAGATCAAGTTTGGAGGGTTTATGCTTCTGTTCCCTTGGACTTGTGTGATAGCTATGATCTTTGTGGAGCTTATGGAAACTGTGTGATATCAGGATCACCTGTGTGCCAATGTTTAAAAGGATTCAAGCCTAAGTCACAAGAAGCATGGGATTCAATGGATTGGACTAAAGGATGTGTTCGAAAGAAGCCACTAAGCTGCGAGGACAAACTCGACGATGGGTTTGTGAAATTCGATGGCTTGAAGTTACCAGATACTAAACATTCTTGGCTTGATGAGACAATGAATCTAGAACAATGCAGAGAGATGTGTTTGAACAATTGTTCTTGTATGGCCTACACTAATTCAAATATAAGTGGAAAAGGAAGTGGTTGTGCCTTGTGGTTTGGTGATCTTCTGGACATGAGACAGTTCCCAGCTGGTGGACAGGATCTATATGTTCGAATGTCTGCTTCAGAACTAGAGGCTGATGGTAACAGCAAGAAGGTGGGGATCTTGGTGGCAGTTATAGTAACTGTTTTTATAGCTACAGTTAGTTCTGCAATCATTCTGGGGTGGCGTTATACCCAGAAAGGAAGCAAAATAAAGGGAGACCACAGTATTAGGGTAGATCATGAAGAGAGTCAAGTGGATGATGACATGGATCTACCATTCTTTGATCTGTCATCAATTGCTGCTGCCACTGGCGACTTTTCAATCGACAGAAAAATTGGAGAAGGTGGATTTGGACCTGTATACAAGGGAAAAATGAAAGATGGGGTAGAAATTGCTGTGAAGAGGCTTTCGGCAAACTCAGGACAAGGATTAACTGAGTTCAAGAATGAAGTAAAACTAATCGCCAAACTTCAACACCGCAATCTTGTAAAGCTCCTTGGTTGTTGCCTTCAAGGGGAGGAGAAAATGCTGGTTTATGAATATATGCCTAATGGTAGTTTGGACTCCTTTATTTTTGATGAGAACAAGGGTAAATTATTAGATTGGTCAAAGCGTTTTCACGTAATTTTAGGAATTGCAAGAGGATTGATGTATCTCCATCAAGATTCCAGATTAAGAATAATTCATAGAGATCTCAAAGCTAGTAATGTCTTACTTGATAAAGAGATGAATCCAAAAATTTCAGATTTTGGCATGGCTAGAATTTTCGGAGATCAAAATGAAGTAAACACAAAGAGAATAGTAGGCACTTATGGTTACATGGCACCAGAATACGCAACTGATGGGCTATTTTCAGTGAAATCCGATGTCTTTAGTTTCGGTGTCTTGGTGCTGGAGATTATATCCGGGAAAAGAAGCAGAGGATATTATAATCCAAATCACAGCCATAACCTCATTGGTCATGCATGGAAATTGTGGAAAGAAGGGAAACAAGTAGAACTAATAGATTCAAGCATACAAGACACATGCTCTCTATCACAAATATTGCATTGCATACATGTGAGTCTCCTGTGTGTTCAGCATCATCCAGAAGATAGACCAGGAATGTCATGTGCCCTGCTAATGTTCTTAAGTGAGATCGAACTGCCGCAGCCGAAACAGCCTGGTTACTTTGGGAATGCTTCTGTTGAAGCATATTCATTTGCAGGTAAACAAGAACTGAGCTCAACAAATGAAATAACCATTACCCTATTAGAACCTCGATGA 2442 0.4124 MDTFAIVLVLCLEVFLAVFCVVESQLVTDGMTLVSEGGTFELGFFSPGSSQKRYLGVWYKNIPIQTVVWVANRNNPINDSSGILTLNSTGNLVLSQNDTVVWSTTTSLRKPESPEALLLDSGNLVVRDKKDPNPEAFLWQSFDYPGDTFLPGMKFGWDLRTGLNKNITAWKSPEDPATGEFSWGMVLNNYPDAFMMLGDQKFYRAGPWNGLRPTGSPQLKENPLFHFEFVQNKDEVYFMYSLKNKYVISRQVLNQTIKARQRFVWLEEDQVWRVYASVPLDLCDSYDLCGAYGNCVISGSPVCQCLKGFKPKSQEAWDSMDWTKGCVRKKPLSCEDKLDDGFVKFDGLKLPDTKHSWLDETMNLEQCREMCLNNCSCMAYTNSNISGKGSGCALWFGDLLDMRQFPAGGQDLYVRMSASELEADGNSKKVGILVAVIVTVFIATVSSAIILGWRYTQKGSKIKGDHSIRVDHEESQVDDDMDLPFFDLSSIAAATGDFSIDRKIGEGGFGPVYKGKMKDGVEIAVKRLSANSGQGLTEFKNEVKLIAKLQHRNLVKLLGCCLQGEEKMLVYEYMPNGSLDSFIFDENKGKLLDWSKRFHVILGIARGLMYLHQDSRLRIIHRDLKASNVLLDKEMNPKISDFGMARIFGDQNEVNTKRIVGTYGYMAPEYATDGLFSVKSDVFSFGVLVLEIISGKRSRGYYNPNHSHNLIGHAWKLWKEGKQVELIDSSIQDTCSLSQILHCIHVSLLCVQHHPEDRPGMSCALLMFLSEIELPQPKQPGYFGNASVEAYSFAGKQELSSTNEITITLLEPR 813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0597 813 SMART blect_4 24 145 IPR001480 -
Lele12g0597 813 Pfam Domain of unknown function (DUF3403) 772 813 IPR021820 GO:0004674
Lele12g0597 813 Pfam Protein tyrosine and serine/threonine kinase 499 762 IPR001245 GO:0004672|GO:0006468
Lele12g0597 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 15 142 - -
Lele12g0597 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 574 776 - -
Lele12g0597 813 ProSiteProfiles Bulb-type lectin domain profile. 18 139 IPR001480 -
Lele12g0597 813 Gene3D - 21 142 IPR036426 -
Lele12g0597 813 Pfam S-locus glycoprotein domain 203 313 IPR000858 GO:0048544
Lele12g0597 813 Gene3D Transferase(Phosphotransferase) domain 1 574 776 - -
Lele12g0597 813 PIRSF SRK 1 813 IPR024171 GO:0004674
Lele12g0597 813 ProSitePatterns Serine/Threonine protein kinases active-site signature. 619 631 IPR008271 GO:0004672|GO:0006468
Lele12g0597 813 Gene3D Phosphorylase Kinase; domain 1 471 573 - -
Lele12g0597 813 CDD STKc_IRAK 504 762 - -
Lele12g0597 813 Pfam PAN-like domain 337 402 IPR003609 -
Lele12g0597 813 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 8 758 - -
Lele12g0597 813 SUPERFAMILY Protein kinase-like (PK-like) 482 780 IPR011009 -
Lele12g0597 813 ProSiteProfiles EGF-like domain profile. 279 315 IPR000742 -
Lele12g0597 813 ProSiteProfiles Protein kinase domain profile. 498 769 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0597 813 SMART serkin_6 498 770 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0597 813 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase At4g03230 463 573 - -
Lele12g0597 813 Pfam D-mannose binding lectin 66 171 IPR001480 -
Lele12g0597 813 CDD PAN_AP_plant 331 415 - -
Lele12g0597 813 CDD B_lectin 24 145 IPR001480 -
Lele12g0597 813 SUPERFAMILY alpha-D-mannose-specific plant lectins 67 176 IPR036426 -
Lele12g0597 813 SMART ntp_6 337 416 IPR003609 -
Lele12g0597 813 ProSiteProfiles PAN/Apple domain profile. 334 417 IPR003609 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0597 Lele-ChrLele12 14399817 14403518 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0597 432 782 Receptor kinase-like Gene Family AT4G23230 54.391 1.51e-127 394
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele12g0597 PK_Tyr_Ser-Thr 4.1e-52 CL0016