Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0595 ATGGCGGAAGATCAATTTCAAGCCACTGGAAACTGGTGGGACTCAGCCAGAAACTCCACCACCAGGTTCGAAACTGAAGCTTCTCAATCCTCCTCTTCCATCCCCAACTTCGCTTGGCAACATACAGATATGTCGTCGCCGTCACATGACCTCAAGCCAAGGTCGTCTTCCATGGCGGCTTCACCTTCTTCCTCCGACCCCAACCTGCACATGATGGGTTTAGGCCTCTCTTCCCAACAACCTCTCGACTGGAATAATCAACCCTCCTTTCTTCGAGGTGCAGAGAAAGGTGGGGATCAGGGCAGTTTCTTGAACGCATCATCAAGCACGAATTTTCAGCAAGAAAGTGTTTTGATGGGGTTGTCTAATCATCATCATCATCATCATCAAGTTCAATGGAGGGACAAGTTGTTTTCTGCAGATTCGTCTTCTTCAACGAACGGGTTCAAACAAGTGAACCACCGGCCACCGGCGGGTTTCTCTTTGGATCAAACTCAGTTCAGTCCTCAACATAGTTCTGGGGAAAGCACTGTAACAACCCAACAAGGCTTAGCTTCTAGTACTACTAACTTTCAGATGGATTTGTATGGAAACTCGTCCATATTACAAGGATTATTAGGACCTGATCATAATAATGACAATAATCAAGTTCAGTATGATCATCATCATCATCATCATCAGAATCAGAATCCCCAGATGAACTTCCCATACCAACAATCTTCAAGCTACGGATTGAACAGTAACGATCAGTTAATTCCTTCATGGTCTAAAGTTCCTCAATTTCTCAGAGCTTCACCTCCAAAACAACAACATGCCCATAATAATAACAATCAGTTGCATTTCACAAACAACGCTCCTTTCTGGAACGCAGCTTCTGAGGCCTCCCATATTAAAGATGTTAGATCTGGTGCTGGCTTCTTTCCCTCTTTGCAACCTCCATTCGCATCTCCAACCTTCGATGTTCAATCCAAGAATATGTGTGAAGTTAGGGAGTTGAGTAGCGTAGTGAAGAAAAGTGGTGGGAGCGAGGCGGCGGCGGCGGCAACCAAAAGGCCTCGGAATGAAACTCCATCTCCTTTGCCTGCGTTTAAGGTAAGGAAAGAGAAGATGGGGGACAGAATCACTGCACTTCAACAATTGGTTTCGCCTTTCGGAAAGACGGATACAGCCTCGGTGCTCTCTGAAGCCATTGAATACATCAAATTCCTCCATGAACAAGTGACAGTTTTAAGTACACCGTATATGAAAAGTGGAGCTCCCATACAGCATCAACAGAGTCCTGGTAAATCTAAAGAAGGTGATGGTGGTGGTGGAAAGCCAGATCTGAGAAGCAGAGGGCTATGTCTGGTGCCTATGTCGAGTACATTTCCGATGCTTTTGGCACATGCTTCTGTGCTTTATACCGAATGGTCACATAAAGGGTCTTCTATTGGAACTATTGGACAGAGAATTATTACTAATGTTGATCCTGGGGCCAGGGGATTGGAGCCTTCTGATTTAAAAGTACTTTATCAAATGTCACTTTATAACTTGTGA 1536 0.4486 MAEDQFQATGNWWDSARNSTTRFETEASQSSSSIPNFAWQHTDMSSPSHDLKPRSSSMAASPSSSDPNLHMMGLGLSSQQPLDWNNQPSFLRGAEKGGDQGSFLNASSSTNFQQESVLMGLSNHHHHHHQVQWRDKLFSADSSSSTNGFKQVNHRPPAGFSLDQTQFSPQHSSGESTVTTQQGLASSTTNFQMDLYGNSSILQGLLGPDHNNDNNQVQYDHHHHHHQNQNPQMNFPYQQSSSYGLNSNDQLIPSWSKVPQFLRASPPKQQHAHNNNNQLHFTNNAPFWNAASEASHIKDVRSGAGFFPSLQPPFASPTFDVQSKNMCEVRELSSVVKKSGGSEAAAAATKRPRNETPSPLPAFKVRKEKMGDRITALQQLVSPFGKTDTASVLSEAIEYIKFLHEQVTVLSTPYMKSGAPIQHQQSPGKSKEGDGGGGKPDLRSRGLCLVPMSSTFPMLLAHASVLYTEWSHKGSSIGTIGQRIITNVDPGARGLEPSDLKVLYQMSLYNL 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0595 511 MobiDBLite consensus disorder prediction 418 444 - -
Lele12g0595 511 MobiDBLite consensus disorder prediction 204 249 - -
Lele12g0595 511 MobiDBLite consensus disorder prediction 1 87 - -
Lele12g0595 511 SMART finulus 365 409 IPR011598 GO:0046983
Lele12g0595 511 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 130 456 - -
Lele12g0595 511 MobiDBLite consensus disorder prediction 338 361 - -
Lele12g0595 511 MobiDBLite consensus disorder prediction 1 106 - -
Lele12g0595 511 FunFam Transcription factor bHLH123 family 364 426 - -
Lele12g0595 511 MobiDBLite consensus disorder prediction 229 249 - -
Lele12g0595 511 Gene3D - 364 424 IPR036638 GO:0046983
Lele12g0595 511 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 354 403 IPR011598 GO:0046983
Lele12g0595 511 MobiDBLite consensus disorder prediction 142 183 - -
Lele12g0595 511 CDD bHLH_AtbHLH_like 360 411 IPR045239 -
Lele12g0595 511 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 364 421 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0595 Lele-ChrLele12 14382745 14386217 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0595 279 458 Basic Helix-Loop-Helix Transcription Factor Gene Family AT3G20640 61.749 2.40e-57 194
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0595 12 14382745 14386217 Lele12g0595 12 14382745 14386217 ECH
Lele09g0735 09 5570031 5572098 Lele12g0595 12 14382745 14386217 hybridization
Lele10g0673 10 5022012 5024131 Lele12g0595 12 14382745 14386217 hybridization