Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0588 ATGGACACTGTTTCTTTCATCTCTGTCGTTGTTTCCATGCTTGTCCCTTCATTCCAAGCTTCTATGGCGGCTGATTCCATCCTTCTGTCCAATTCCTCAATGAGAATGATTTCTAAAGGTGGAAGCTTTGAACTTGGGTTCTTCAGTCCTGGAAGCTCTGGTAAACTCTATCTGGGAATTTGGTACAGAAACATCCCAATTCAGACAGCGGTTTGGGTTGCAAACAGAGTCAACCCAATCAACGATTCTTCTGAAACTGCCACTTTAACACTCAACAACACAGGTAGTCTTGTACTCACCCAAAATAATAGGGTTATTTGGTACTCATCAACTTCTCTGAAACAAGTGCAGAATCCAGTGGCTGAGCTCTTAGATTCTGGAAACCTTGTGGTACGAGAAGAGAAGGACGATAACCCAGAAGCTTATTTGTGGCAAAGCTTCGACTACCCAAGTGACACAATGCTACCGGATATGAAATTGGGATATGACCTGAGAACAGGTTTAAATAGACGTCTAACATCTTGGAGAACACCTGCAGATCCATCTCCAGGTGATGACTTTTCTTTAACTCTTGCCTCCCGTGACTATCCTGAGTTTTATATGATGACAGAAGGTTCAAAGTTCTTCAGAAATGGACCATGGAATGGCGTCGGATTTAGTGGCTCACCTGAACTAAAACAGAATAATCTTTTTGATTACGAGTTCGTATCCACAAGAAATAAGTCCTACTATGTGTACACTCTCAAGAATAGTTCTGTAATCACAAGGTACACTATCAACTTAACTGAGCAAGCTATGATTCGCTATGTGTGGGTAGATAAAAATTGGAAGCTTTATGCTAAAAAGCCAAGTGACTACTGTGACCAATATAAGTTGTGTGGACCCAATGGGAAATGTGTCATAACTGAATCACCACCGTGCCAATGTCTCAAAGGGTTCGTGCCTAAGTCACCACAGAAATGGAACTCAGTGGACTGGTCTGATGGATGTGTCCGCAATAAACCTTTGAACTGCTATGAAAAAGAAAAGGACAAATTTGTCAAAGTGGAGGGGCTGAAAGTACCAGAAACTACAAATTCTTGGGTTGATGAGACAATGAATCTTGCGCAATGCAGAGAAAAGTGCTTGGATAATTGTTCATGCATGGCTTATACTAATTCAGATATCAGAGGGGCTGGTAGTGGTTGCGTCTTGTGGTTTGGTGATTTAGTTGATATCAGATCTTATGCATCCGGAGGACAAGATCTATATGTTCGAATGCCTGCTTCAGAATTAGAATCTGGGAACAATAAGAAGTTGATAATGATTATTGCTTTCACCACTGCTGCGACTTTATGCTTGCTTTTAGTTGGGGGCTATTTCAGTTACAAAGTCTGCTGGAAGAGGATTGAGATATCAAAAGGTGCAGAAGTTGAAATTCAAAACAATGAAACGGATGATCTAGATCTCCCACTGTTTGATCTCCCGACACTAGCACAAGCCACCGAAAATTTTTCAGAGAAGAATAAAATCGGACAAGGTGGATTTGGACCTGTATATTGGGAAATAGAAGGGAATACAAAAAGAATAATGGGTACTTATGGATATATGGCACCGGAATATGCAGCAGATGGTCTATATTCAGTAAAATCTGATGTTTTTAGTTATGGTATACTAGTACTAGAGATTATTAGTGGAAAGAAAAATAGAGGGTTCTATCTAGAAGACTCAAAACACAACCTTATTGGGAATGCATGGATACTGTGGAATGAAGGAAGGGTGTTAGAATTGATTGATAAGAACATAGAGGAGACTTGCAATGTATCAGAGATATTAAGATGCGTTCATGTGAGTTTATTGTGTGTGCAGCAACATCCAGAGGATAGGCCCACCATAGCATCTGCAATTTTGATGCTGGAAAGTGAAGTTGAACTTCCTCAGCCCAAACAACCAGGCTTCTTTCATTGGAAGGATTCAGTTGAACCACATACTTCCAACTCAAGTCAAAACCAACGTAGCTCAACCAATGAAATGACAATGAGCTTACTTGAAGCCAGATGA 2040 0.4049 MDTVSFISVVVSMLVPSFQASMAADSILLSNSSMRMISKGGSFELGFFSPGSSGKLYLGIWYRNIPIQTAVWVANRVNPINDSSETATLTLNNTGSLVLTQNNRVIWYSSTSLKQVQNPVAELLDSGNLVVREEKDDNPEAYLWQSFDYPSDTMLPDMKLGYDLRTGLNRRLTSWRTPADPSPGDDFSLTLASRDYPEFYMMTEGSKFFRNGPWNGVGFSGSPELKQNNLFDYEFVSTRNKSYYVYTLKNSSVITRYTINLTEQAMIRYVWVDKNWKLYAKKPSDYCDQYKLCGPNGKCVITESPPCQCLKGFVPKSPQKWNSVDWSDGCVRNKPLNCYEKEKDKFVKVEGLKVPETTNSWVDETMNLAQCREKCLDNCSCMAYTNSDIRGAGSGCVLWFGDLVDIRSYASGGQDLYVRMPASELESGNNKKLIMIIAFTTAATLCLLLVGGYFSYKVCWKRIEISKGAEVEIQNNETDDLDLPLFDLPTLAQATENFSEKNKIGQGGFGPVYWEIEGNTKRIMGTYGYMAPEYAADGLYSVKSDVFSYGILVLEIISGKKNRGFYLEDSKHNLIGNAWILWNEGRVLELIDKNIEETCNVSEILRCVHVSLLCVQQHPEDRPTIASAILMLESEVELPQPKQPGFFHWKDSVEPHTSNSSQNQRSSTNEMTMSLLEAR 679
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0588 679 Pfam Domain of unknown function (DUF3403) 635 679 IPR021820 GO:0004674
Lele12g0588 679 SMART blect_4 25 150 IPR001480 -
Lele12g0588 679 Gene3D Phosphorylase Kinase; domain 1 460 518 - -
Lele12g0588 679 SMART ntp_6 341 420 IPR003609 -
Lele12g0588 679 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase 18 147 - -
Lele12g0588 679 Pfam PAN-like domain 338 406 IPR003609 -
Lele12g0588 679 ProSiteProfiles EGF-like domain profile. 283 319 IPR000742 -
Lele12g0588 679 MobiDBLite consensus disorder prediction 653 679 - -
Lele12g0588 679 Pfam S-locus glycoprotein domain 209 317 IPR000858 GO:0048544
Lele12g0588 679 Gene3D Transferase(Phosphotransferase) domain 1 519 669 - -
Lele12g0588 679 Pfam D-mannose binding lectin 69 176 IPR001480 -
Lele12g0588 679 ProSiteProfiles PAN/Apple domain profile. 338 421 IPR003609 -
Lele12g0588 679 ProSiteProfiles Bulb-type lectin domain profile. 19 144 IPR001480 -
Lele12g0588 679 CDD B_lectin 38 150 IPR001480 -
Lele12g0588 679 CDD PAN_AP_plant 335 421 - -
Lele12g0588 679 SUPERFAMILY alpha-D-mannose-specific plant lectins 70 181 IPR036426 -
Lele12g0588 679 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 513 637 - -
Lele12g0588 679 Pfam Protein tyrosine and serine/threonine kinase 527 627 IPR001245 GO:0004672|GO:0006468
Lele12g0588 679 MobiDBLite consensus disorder prediction 649 679 - -
Lele12g0588 679 Gene3D - 17 147 IPR036426 -
Lele12g0588 679 PANTHER BULB-TYPE LECTIN DOMAIN-CONTAINING PROTEIN 519 623 - -
Lele12g0588 679 SUPERFAMILY Protein kinase-like (PK-like) 520 665 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0588 Lele-ChrLele12 14300396 14304128 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0588 503 646 Receptor kinase-like Gene Family AT4G23230 51.020 9.15e-44 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Lele12g0588 PK_Tyr_Ser-Thr 1.1e-08 CL0016