Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0576 ATGGATTCTCAGCAGTTGTTCAGTTTTAGTGTGACTGGGTCAGGGATTCCATTCACGCCTTCTTATTCCACCATCCCATCACTACCTACAAGGTTTCTTGGATCCTTGAAATTTGAAACAGGAAACTCACCTAATTCTCCCTTTTCTACTCAATTTGATTCTGATTCTCTCTCTAATTTGAGCGACGGCCAGAATCTACAACACGGCTCTGGGGAGATTCTTTCTGGTTTCAGCCCTTCATATAACTCTTCTCTGGAAACTAATTACTACTTAAACAGGTCAGTCTCACCTGTGGACCGTCTCCAAGACAGTCTACATCCGTATTTTGCTAGGAGGTCTCTTGCACAGGATGCAAGTTCCAGCCAAAAGATCAGGCACGCTTTGCTGGAGTTAGAGTCTGCTCTGATGGCTCCTGATGATGGTGATGTAGTTACCACATCAAATACGTCTTTGAGCGGGAATAACAGACCTACAACTTCTGGCCAAAGATATGGTTCTTGGAGCCAGGAGCTTCAAGGGTCACAATATGTTCAAAGCCAGCCATCTTTTTTCACTAGCATTAGGCAGTCAAATGAAGATGCGCACGTAGAAAAGCGTCACAAAGTAATGGAGGAAGCATGGCTCCAGGGCTTCCCGCCTAGCGGTTTAAAAGAATTGTTGATTGCTTGCGCCAAAGCCCTCTCTGAAAGCAACATGAAAGTTTTTGATGAGTTGATTGAAAAGGCTAGAAGTGCTGTGTCTATCTGTGGTGAGCCAATCCAGCGGCTCGGTGCCTATATGGTAGAAGGGCTTGTTTCTAGGAAGGAGGCATCAGGAAATAGCATATATCATGCTCCCAGGTGCCGAGAACCCGAAGGCAAAGACCTGCTCTCTTACATGCACATGCTGTATGAGATTTGCCCGTACTTTAAATTCGGTTACATGGCTGCCAATGGAGCCATAGCTGAAGCTTGCAGAAATGAAGACCGTATTCACATCATAGACTTCCAGATTGCTCAGGGAGTTCAGTGGGAGACACTCCTTCAAGCTCTTGCTGCAAGGCCTGGTGGGGCACCCCATGTCCGAATCACCGGGATCGATGATCCAATTTCTCAATATGCACGTGGTGACGGCCTAGATGCAGTTGGGAAAAAATTGACTGTGATATCGGAGAAATTTGGTATCCCGGTTGAGTTTCATGGAGTGCCTTTGTTTGCTCCGAAAGTTACAAGGGACATGCTTGATGTAAGGCCAGGAGAGGCTTTGGCTGTTAACTTTCCCCTGCATCTGCATCACACGGCTGATGAGAGTGTTGATGTGAACAACCCAAGGGATGAACTTCTGAGAATGGTGAAGTCACTTGGTCCCAAGGTGGTCACATTGGTGGAACAAGAATCCAACACAAACACAACACCATTCTACTACAGGTTCTTGGAAACATTGGACTGCTACTTGGCTATGTTCGAGTCAATTGATGTCACCCTGCCAAGAAATAGCAAGGAGCGGATTAACGTGGAGCAGCATTGCTTGGTGAGGGACATCGTGAACGTCATTGCTAGTGAGGGGAAGGAAAGGATAGAGCGGCACGAGCTGCTGGGAAAGTGGAAGTCAAGGTTGACGATGGCTGGATTCCGACAGTATCCATTGAGCACTTACGTGAATTCTGTGATCAGAAGCCTACTTGGATACTATTCAGAGCATTATACGCTAGTGGAGAAGGAAGGGGCTATGTTGTTGGGGTGGAAACACAGAAACTTGATATCAGCCTCAGCCTGGCATTGA 1761 0.4673 MDSQQLFSFSVTGSGIPFTPSYSTIPSLPTRFLGSLKFETGNSPNSPFSTQFDSDSLSNLSDGQNLQHGSGEILSGFSPSYNSSLETNYYLNRSVSPVDRLQDSLHPYFARRSLAQDASSSQKIRHALLELESALMAPDDGDVVTTSNTSLSGNNRPTTSGQRYGSWSQELQGSQYVQSQPSFFTSIRQSNEDAHVEKRHKVMEEAWLQGFPPSGLKELLIACAKALSESNMKVFDELIEKARSAVSICGEPIQRLGAYMVEGLVSRKEASGNSIYHAPRCREPEGKDLLSYMHMLYEICPYFKFGYMAANGAIAEACRNEDRIHIIDFQIAQGVQWETLLQALAARPGGAPHVRITGIDDPISQYARGDGLDAVGKKLTVISEKFGIPVEFHGVPLFAPKVTRDMLDVRPGEALAVNFPLHLHHTADESVDVNNPRDELLRMVKSLGPKVVTLVEQESNTNTTPFYYRFLETLDCYLAMFESIDVTLPRNSKERINVEQHCLVRDIVNVIASEGKERIERHELLGKWKSRLTMAGFRQYPLSTYVNSVIRSLLGYYSEHYTLVEKEGAMLLGWKHRNLISASAWH 586
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0576 586 MobiDBLite consensus disorder prediction 143 165 - -
Lele12g0576 586 Pfam GRAS domain family 216 585 IPR005202 -
Lele12g0576 586 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 175 582 IPR005202 -
Lele12g0576 586 MobiDBLite consensus disorder prediction 44 65 - -
Lele12g0576 586 ProSiteProfiles GRAS family profile. 207 586 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0576 Lele-ChrLele12 14205601 14207361 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0576 124 585 GRAS Transcription Factor Family AT5G48150 53.132 1.77e-170 491
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Lele12g0576 GRAS 1.1e-123 CL0063
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0576 12 14205601 14207361 Lele12g0576 12 14205601 14207361 ECH
Lele09g0758 09 5964024 5965781 Lele12g0576 12 14205601 14207361 hybridization
Lele10g0688 10 5198252 5200012 Lele12g0576 12 14205601 14207361 hybridization