Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0573 ATGCCAACGGTTTGGTTCTCTCTCAAGAAGTCTCTACACTGCAAATCAGAGCCATCAGAAGTTCATGACCCAAAATCCAGAAAGCATTTGAGCACAATCTTAACGAAAAGGGCTGGTAGGTCTGGGTGTTCGAGGAGTATAGCAAATCTCAAAGATGTGATCCACGGAAGTAAGAGGCATCTCGAGAAGCCCCCGAGTTGCAGTCCAAGATCCATTGGGAGTAGTGAATTTCTCAACCCAATAACCCACGAAGTGATTTTAAGTAACTCAAGGTGTGAGCTTAAAATCTCTGGCTTTGGAGGATTTCAAGATGGGGTTGGCGGCGGAGGCGTAGCTAAGGGCGCTGGAGGTGGTGGTAATAATGGCGGCGTTGGCGGTGGCGGCTCTACCTTTGTGGGTACTTTAAGGCCTGGGACTCCTGGACCTGGAGGACACCCAACAATGCACTACTTTAATCCTTCTTTTAGAACATCAACCACTCCTCCAAGGAAATCTCCAAGTCCTTTTCTTTTATCAGATAAAGAAGGATCGGCTTTGCATGGTGGTGTTGGGCTTCATTCTAGCAATAGAATGTGTCTTGAGACAGAGTCTAATGGATGTTCCACTGTTACTTGTCACAAATGTGGAGAGCAATTTACTAAATGGGAAGCTGCTGAAACTCATCATCTCTCCAAGCATGCTGTTACTGAGCTTGTGGAAGGAGATTCATCCAGGAAGATAGTGGAGATAATATGCAGGACGAGCTGGTTAAAATCTGAGAATCACTGTGGGCGAATAGAGAGAGTTTTGAAGGTTCACAACATGCAAAAGACACTGGCAAGATTTGAAGAATACAGAGAAATGGTAAAAATCAAAGCTAGTAAACTCGCAAAGAAACATCCTCGTTGTCTTGCTGATGGGAACGAGCTTTTAAGGTTCTATGGCACAACTGTGTCCTGCAATCTTGGGCTTAACAGCTCATCAAGCCTCTGCCTGTCAGAAAAATGCTGTGTTTGTAGAATTATCAGAAACGGGTTTTCTGCAACGAAGGAGCTAAAGGGTGGAATAGGAGTTTTCACAACTTCCACAAGCGGAAGAGCATTTGAATCAATTGAGATCCTGGATGATGACATTTCAATGAGAAAAGCACTCATTGTTTGCAGAGTAATAGCTGGCAGAGTTCATAGGCCACTTGAGAACATTCAAGAAATGGCAGGCCAAACAGGGTTTGATTCTTTGGCCGGCAAAGTTGGTCTTTATTCAAACATAGAAGAGCTTTATTTGCTCAATCCTAAAGCCCTTCTTCCTTGCTTTGTCGTAATTTGCAAGCCCTGA 1314 0.4422 MPTVWFSLKKSLHCKSEPSEVHDPKSRKHLSTILTKRAGRSGCSRSIANLKDVIHGSKRHLEKPPSCSPRSIGSSEFLNPITHEVILSNSRCELKISGFGGFQDGVGGGGVAKGAGGGGNNGGVGGGGSTFVGTLRPGTPGPGGHPTMHYFNPSFRTSTTPPRKSPSPFLLSDKEGSALHGGVGLHSSNRMCLETESNGCSTVTCHKCGEQFTKWEAAETHHLSKHAVTELVEGDSSRKIVEIICRTSWLKSENHCGRIERVLKVHNMQKTLARFEEYREMVKIKASKLAKKHPRCLADGNELLRFYGTTVSCNLGLNSSSSLCLSEKCCVCRIIRNGFSATKELKGGIGVFTTSTSGRAFESIEILDDDISMRKALIVCRVIAGRVHRPLENIQEMAGQTGFDSLAGKVGLYSNIEELYLLNPKALLPCFVVICKP 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0573 437 FunFam C2H2-like zinc finger protein 227 436 - -
Lele12g0573 437 ProSitePatterns Zinc finger C2H2 type domain signature. 205 226 IPR013087 -
Lele12g0573 437 MobiDBLite consensus disorder prediction 127 173 - -
Lele12g0573 437 Gene3D - 218 436 - -
Lele12g0573 437 MobiDBLite consensus disorder prediction 151 166 - -
Lele12g0573 437 PANTHER C2H2-LIKE ZINC FINGER PROTEIN 4 435 - -
Lele12g0573 437 SUPERFAMILY ADP-ribosylation 228 436 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0573 Lele-ChrLele12 14173603 14175295 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0573 1 437 C2H2 Transcription Factor Family AT5G54630 66.738 0.0 572
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Lele12g0573 None None None