Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0571 ATGCTGAGTGGCATTATGTGCACCATTATTAGTAAAAGGGATGGGAAGGCTCTAAAACTGGTTATAATTTCTTGGCTGCAGGCAGCACAGTTATGTTCCTCATGCTGGGTGGATTTGATTCAGTTAAAGGAAGAGGTAGAAGATCTTGGTGTATGGTTCCCGCAAGAATCATCCAGTAGCACTGATGAAAATTCAGAAATTCGATATATGTTGAGAGAAAACATCCAAAATTTGATTAATGCTCACCATTCACGGTTAAAGCAAGCTTTTCTTAATTGTTTGAGACAGAATGATCTACCATTCCATGTCTCTGGAGAAGACGCTGATTCTAAGACATCGCATGCCTCTTTTATAGAATCAATGTTTTCCAGATCCAGCGTTCTTAGAAGAAATTTGGCTCAGGAACTTCCTCAACACATATCATTAGCCCCTAGCCCAGGTCCTGCAGTTATGTCACCAGCTCCTAGTCCAGCGCCATCACCTGAGCTGGCCCCATCACCTTCCATCTCTCAAGTTCCTAAATCTGGGCGTCCTTCTTCGTCACATCAAACTCCATTCTTCCGACAGCTGGAGCCTCCAGCTACTGGGGATATCACTTCACAGCCATCTTCAGATGCTGATATTCAGGAAGATAAGAAAAGTAATCATAAAAGAACAGTTGTTCTTGCTGTAGTAATAACTGCTCTCGTGACATTTGTAATTGCAGCACTATTATTTTTATGCTGCAGTAGGTATAGGAGTGGTCGACGTAAACAAAATGATGAGAGGCCCCTTCTCAACTTGAGCATGAGCGACTATTCTATTGGCTCTTCCAATTATACTTTTGGAAATTCAGTGAAAGAGGAGAAACTTGGGTTTCAGTCATCAACTAATTACACTGGTGACCACAAAAAGATATCATCTGTGAATGCCAAGTCCCATGTTAGCTCCAATATTTTCCATACCACAGTGCAGGAAGCTCAATCAATAGCAGCTGTTGGTGTTGCTGCTGGATCATCAATTGAACAGAGACCTCCTCCTGGGAGGGAGGGAAGCACCACTTCTGGATTGCCTACTCTAAAACCTCCTCCTGGGAGGGTGGGAACAGCCACTTCTAGATTGCCTCCTCTAAAACCTCCTCCTGGGAGGGCAGGAACCACCACTTCTGGATTGCCTCCTCTAAAACCTCCTCCTGGCAGACTGAACCCTCTTCCCCCTGAACCACCTTTTAGACCTGATAATGCTGCTCCTCCTCCTCCACCTCCGGCCCCTTCACAACCTGTGAAATCTCACTCTGATACTGGTGGAGCTCCAACTCCAGGACCTCCTCCACCTCCTGTACCCCCACAACCTGTGAGACATCATTCTAATGTCAGGGGAGCTCCACCTCCTGGACCTCCACCACCACCACCACCACCTGGTGCCCGACCAGGTGTTCATCCACCACCACCTCCTCCTCCAAAGGGCGGTATAGCTCCTCCTCGACCTCCTTCACCTATTGGTCCAAAAATAGCACAGCTAAAGTCTCCACAGAATGCAGGAGCATGTTCAGAAGGTGAAGCCCATGCTCCTAAAGCCAAGCTAAAACCTTTTTTCTGGGATAAGGTCCAAGCCAACTCAGACCATTCAATGGTCTGGAATCAGATTAAATCGGGATCATTCCAGTTTAATGAAGAGATGATAGAGACTCTTTTTGGCTATAGTAATGTGGATAAACACAAAAGCGAACCAAAGAAAGAGTCATCCTCTCAAGACCCTGCAACTCAGTATATCCAGATAATTGACAGGAAAAAAACACAAAATTTGTTGATTTTGCTGCGAGCCTTGAACATCTCAACAGAAGAAGTTTGTGATGCGCTTCATGAGGGAAATGAGCTTCCCTCAGAATTTCTGCAAACCTTGCTGAAGATGGCGCCAACATCCGAAGAAGAACTTAAACTTAGACTTTTTAGTGGTGAAATGTCCCAACTTGGGCCTGCAGACCGATTCATAAAAGCTTTGGTTGACATTCCATTTGCTTTTAAACGAATGGAAGCATTGCTTTTCATGAGTACTTTTCAAGAGGATCTCACTGCCACTAAGGGGTCCTTAGCAACTTTAGAGGTTGCCTGTAAGGAACTAAGAAGCAGTCGGCTGTTCCTCAAGCTTCTTGAAGCTGTTCTTAAAACTGGAAACCGTATGAATGATGGTACATACCGTGGTGGTGCACAAGCATTTAAACTTGATACACTACTGAAATTGTCTGATGTGAAAGGAACGGATGGCAAGACCACACTCTTGCACTTCGTAGTCCAAGAGATAGTCCGATCCGAGGGCAAAAGAGCTGCTCGACTGGAGAAAGAAAACCAGAGTTCCTCCGGTATTAAAAAAGATGGCCGTCTTTGTGATGTATCTGATGAAACTGAGGAACACTATCGTGATCTTGGTCTTCAGGTGGTTTCACATTTGAGCAGTGAACTGGACAATGTTAAGAAAGCAGCAGCTATCGATGCTGACAGTTTAATAGGAACTGCTGCCAAACTTGGCCAGGGTGTCCTTAAAATCAGAAATTTTGGGAACATTGACTTGAAGAGTATAGAGAAAGATAGAGAATTTTGCCAGGCAGTGAAGGGTTTTGGGCAGGATGCTGAGAATGATGTCACTAGTCTGCTGGAAGAAGAGAAGAAAATCATGGCTCTGGTGAAGAGCACTGGTGATTATTTTCACGGGAAAGCCGGGAAAGATGAAGGATTGCGGTTGTTTGTGATAGTACGGGACTTCTTGATGATGTTAGATAAGGTGTGCAAGGAAGTGAAAGACGCCCCGAAGCAGATACCAAAAGCTCAAAAGCAAGAGGCGCCTAAAGCATCATCTTCCTTTGATGTTTGTTCACCTCCTGATTTTCGTCAGCTGCTTTTTCCAGCAATTGCAGATAGGCGAGTGAAAGACGATAGTTCAGACGATGAGAATGAACCTTGA 2937 0.4484 MLSGIMCTIISKRDGKALKLVIISWLQAAQLCSSCWVDLIQLKEEVEDLGVWFPQESSSSTDENSEIRYMLRENIQNLINAHHSRLKQAFLNCLRQNDLPFHVSGEDADSKTSHASFIESMFSRSSVLRRNLAQELPQHISLAPSPGPAVMSPAPSPAPSPELAPSPSISQVPKSGRPSSSHQTPFFRQLEPPATGDITSQPSSDADIQEDKKSNHKRTVVLAVVITALVTFVIAALLFLCCSRYRSGRRKQNDERPLLNLSMSDYSIGSSNYTFGNSVKEEKLGFQSSTNYTGDHKKISSVNAKSHVSSNIFHTTVQEAQSIAAVGVAAGSSIEQRPPPGREGSTTSGLPTLKPPPGRVGTATSRLPPLKPPPGRAGTTTSGLPPLKPPPGRLNPLPPEPPFRPDNAAPPPPPPAPSQPVKSHSDTGGAPTPGPPPPPVPPQPVRHHSNVRGAPPPGPPPPPPPPGARPGVHPPPPPPPKGGIAPPRPPSPIGPKIAQLKSPQNAGACSEGEAHAPKAKLKPFFWDKVQANSDHSMVWNQIKSGSFQFNEEMIETLFGYSNVDKHKSEPKKESSSQDPATQYIQIIDRKKTQNLLILLRALNISTEEVCDALHEGNELPSEFLQTLLKMAPTSEEELKLRLFSGEMSQLGPADRFIKALVDIPFAFKRMEALLFMSTFQEDLTATKGSLATLEVACKELRSSRLFLKLLEAVLKTGNRMNDGTYRGGAQAFKLDTLLKLSDVKGTDGKTTLLHFVVQEIVRSEGKRAARLEKENQSSSGIKKDGRLCDVSDETEEHYRDLGLQVVSHLSSELDNVKKAAAIDADSLIGTAAKLGQGVLKIRNFGNIDLKSIEKDREFCQAVKGFGQDAENDVTSLLEEEKKIMALVKSTGDYFHGKAGKDEGLRLFVIVRDFLMMLDKVCKEVKDAPKQIPKAQKQEAPKASSSFDVCSPPDFRQLLFPAIADRRVKDDSSDDENEP 978
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0571 978 Gene3D Formin, FH2 domain 516 945 IPR042201 -
Lele12g0571 978 MobiDBLite consensus disorder prediction 330 514 - -
Lele12g0571 978 MobiDBLite consensus disorder prediction 148 166 - -
Lele12g0571 978 PANTHER FORMIN-RELATED 431 965 IPR027643 GO:0003779|GO:0030036|GO:0045010|GO:0051015
Lele12g0571 978 MobiDBLite consensus disorder prediction 453 496 - -
Lele12g0571 978 MobiDBLite consensus disorder prediction 167 205 - -
Lele12g0571 978 MobiDBLite consensus disorder prediction 928 952 - -
Lele12g0571 978 ProSiteProfiles Formin homology-2 (FH2) domain profile. 511 943 IPR015425 -
Lele12g0571 978 MobiDBLite consensus disorder prediction 384 420 - -
Lele12g0571 978 SUPERFAMILY Formin homology 2 domain (FH2 domain) 475 930 - -
Lele12g0571 978 MobiDBLite consensus disorder prediction 430 445 - -
Lele12g0571 978 Pfam Formin Homology 2 Domain 513 917 IPR015425 -
Lele12g0571 978 MobiDBLite consensus disorder prediction 140 214 - -
Lele12g0571 978 SMART it6_source 511 930 IPR015425 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0571 Lele-ChrLele12 14158847 14162934 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0571 516 967 FH2 protein (formin) Gene Family AT5G54650 66.886 0.0 586
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0571 12 14158847 14162934 Lele12g0571 12 14158847 14162934 ECH
Lele09g0764 09 6007745 6012760 Lele12g0571 12 14158847 14162934 hybridization
Lele10g0694 10 5239200 5244167 Lele12g0571 12 14158847 14162934 hybridization