Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0557 ATGTCAAGATCGTATACAAATCTTTTGGATTTGGCATCAGGGAATTTCCCAGCAATGGGTAGGGAGTCTAAAGAAAGAAAGCGGCTGCCAAGAGTTATGACTGTCCCTGGGATAATTTCAGAACTTGATGATGATCAGCCACATAGTGTTTCTTCTGATAATCCATCAACTGTTTCTACAGATAGGATTATCATTGTAGCTAACCAGCTTCCTTTGAAAGCAAAGCGAAAGGAGGAAAATAAGGGTTGGAGTTTCAGTTGGAATGAAGATTCATTGCTTTTACAGCTTAAAGATGGACTTCCTGAAGAGATGGAGGTTCTTTATGTTGGGTCATTGCGGGTTGATGTTGATCCAGCTGAACAGGATGACGTGACTCTTCCTGTGAGGGAAGAGATACTTAAAGCTTTACTTAATTCTGATATCATTGGTTTCCACACCTTTGACTATGCTCGCCATTTTCTGTCCTGTTGCAGTCGTATGTTAGGTCTGGAGTATCAGTCAACGAGGGGCTACCTAGGATTGGAATATTACGGAAGGACTATAAGTATTAAGATTATGCCAGTTGGGGTTCACATGGATCGTATTAAAACAGTCATGAGAATGGCAGATGAAGAGTCTAAAGTAAAGGAGCTGAAACAGCAATTTGAAGCAAAAACTGTCTTGCTTGGTGTTGATGATATGGACATTTTTAAAGGTATTGATTTGAAGATTTTGGCTATGGAGCAGATGCTTAGTCAACATCCTAAATGGCAAGGAAGAGCTGTTTTGGTCCAGATAGTAAATCCTGCTAGGGGTAATGGTATACATCTAGAGGGCATATGGGCTGACATTCAAGAAAGCTGCAACAGGATCAACAGAGTATTTGGACGTCCTGGTTATGAACCTATTGTATTTATAGATAGACCAGTTTCAGTTGCAGAAAAAGCTGCTTATTATAGCATTGCTGAATGTGTTGTTGTCACAGCTGTAAGAGATGGGATGAACCTAACTCCTTACGAATATATTGCTTGTAGACAGGAAATGCCTAGTTCTGAATCATGCACTAATGCCAATGGGTCAAAGAGCATGCTTGTGATATCAGAATTTATTGGGTGTTCTCCATCACTTAGTGGGGCTATCCGTGTTAATCCATGGAATGTTGAAACAACTGCAGAGGCAATGAATGAGGCCATCTCAATGGCTGATGGAGAGAAGCAGTTGCGTCATGAAAAGCATTATCGTTATGTTAGCACCCATGACGTGGCTTATTGGTCACGTAGTTTCTTGCATGATATGGAGAGGGCTTGCTCAGACCTTCTGCGGAAAAGATGTTGGGGAATAGGTCTTAGCTTTGGATTCAGAGTTGTGGCACTTGATCCTAATTTTAGAAAGCTCTCCATTGATGCTATGGTTTCAGCCTACAAGAGGGCGAAGAGTAGGGCCATTTTGTTGGACTATGATGGCACTGTTACGCCACAGAACTCTATTAATAAGATTCCAAGTCCAGGGGTCATCTCTATTTTGAACACACTCAGTGCAGACTCAAAAAATGTAGTTTTCATTATGCTTCGGCTGAAGCTCAGATATGCTTTGGCTTATATTGAAGTGTTATCCTTTCTTGGTTTTGCCTTGTGTTAA 1617 0.4106 MSRSYTNLLDLASGNFPAMGRESKERKRLPRVMTVPGIISELDDDQPHSVSSDNPSTVSTDRIIIVANQLPLKAKRKEENKGWSFSWNEDSLLLQLKDGLPEEMEVLYVGSLRVDVDPAEQDDVTLPVREEILKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSTRGYLGLEYYGRTISIKIMPVGVHMDRIKTVMRMADEESKVKELKQQFEAKTVLLGVDDMDIFKGIDLKILAMEQMLSQHPKWQGRAVLVQIVNPARGNGIHLEGIWADIQESCNRINRVFGRPGYEPIVFIDRPVSVAEKAAYYSIAECVVVTAVRDGMNLTPYEYIACRQEMPSSESCTNANGSKSMLVISEFIGCSPSLSGAIRVNPWNVETTAEAMNEAISMADGEKQLRHEKHYRYVSTHDVAYWSRSFLHDMERACSDLLRKRCWGIGLSFGFRVVALDPNFRKLSIDAMVSAYKRAKSRAILLDYDGTVTPQNSINKIPSPGVISILNTLSADSKNVVFIMLRLKLRYALAYIEVLSFLGFALC 538
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0557 538 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 30 123 IPR001830 GO:0003824|GO:0005992
Lele12g0557 538 Gene3D Glycogen Phosphorylase B; 123 199 - -
Lele12g0557 538 FunFam Alpha,alpha-trehalose-phosphate synthase 198 410 - -
Lele12g0557 538 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 61 429 - -
Lele12g0557 538 Pfam Trehalose-phosphatase 476 515 IPR003337 GO:0003824|GO:0005992
Lele12g0557 538 CDD GT20_TPS 125 426 IPR001830 GO:0003824|GO:0005992
Lele12g0557 538 Gene3D Glycogen Phosphorylase B; 200 411 - -
Lele12g0557 538 Pfam Glycosyltransferase family 20 125 426 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0557 Lele-ChrLele12 13893230 13895380 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0557 85 515 Trehalose Biosynthesis Gene Families AT1G06410 70.070 0.0 629