Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0544 ATGTTGGTGAGCCAACCCCTTTTGCTAGCTGGCTGTCGGAGAGCTGTCCCCAGAACCATCTCGCCCTGCACGTCATATGACCTCCAGCTTGAAGCAAGTGGAGCTACTGAGGACATGGCGGAGACACGAGAAGATTCAGGGCCTGCAGGGCAAGGGCCCTCTAATGCTTCATGGTGGACTTCAGATTTCATTGAAAAATTTGGATCTGTTTCTCTTGGATCTCAAGATGAGGCCTTAAACAATAAAGAATCACCTAGATATTCAGAGCAAGGTGATTTTTCACCTTATAGAGCATCTCAAATTCTCTGGCGTACCGGAATGCTTTCAGAACCAATACCAAATGGGTTTTATTCAGTCATACCGGAGAAAAGACTCAAGGAACTTTTTCATAATATTCCTACTTTGGAAGAGCTTCTCGCTTTAGGAGGAGAGGGTTTTAGGGCTGATATCATTCTTGTGGATTCAGAAAAAGATAAAAGGCTATCCATGTTGAAGCAGCTGGCGCTGGCACTAGTAAAAGGATTGAACTCAAATCCAGCTGCAGTTATTAAGAAAATAGCAGGATTAGTTTCTGATTTTTACAAGCGGCAAAATGTAGAAAGTCCAGCAAAAGCTGCACTGGAAGAAGCCTCCCACATGTTTGAGAATCTAAGTGTCCAGTTACTGGGGCAGATAAAGCATGGTTCATGCCGTCCTCGAGCAATCTTATTTAAAGTTTTAGCAGATACTGTAGGACTTGAAAGTAAACTAATGGTGGGTTTGCCAAACGATGGGGTCCCTGAATGTGCAGATTCATACAAGCATTTGTCTGTCGTAGTTGTATTAAATTCTGTGGAGCTATTGGTTGATCTCATGCGATTCCCTGGCCAATTATATCCACAATCAACCAAGGCAATTTTTATGACGCATATTTCTGCAGCAGGAGAGAGTGATTCTGCGGAGAATGATTCCTGTGATTCGCCATTAGAACCCAACAGTCCTTTATATGGGGTTTCAGAGAGAGTAGATATTGACAGTGCTGAAAGAGAGGAAAATCTCCTATTTCACAGAAGACATGAAGCATCTTCAAATTTATCAGGCATTTCTTTGCGGAATTCTATGTTACGTTCAAATGTCATTCTGGACAATAAATTGAGTTTGTCTCATAGTGAACCCAACATTGCAACTGCATTTGGCCGGCGTAGTCGGAGAAGGGTCATTGCTGAACAGAGGACAGCTAGTTCAAGTCCAGAACATCCCTCATTTCGAGCGCGGGCACGGTCCATGCTTAGCGGTGATAGGAAAACATTTAGAGATTTTGCGGATGACCGGGCTACATCAAGCTATAGGTCAGATGGTGCTCCGTCATCAGAAGCGCGTAGGATCAGAAGAAGAAGCATCAGCATTACACCAGAAATTGGTGACGATATCGTAAGGGCTGTACGGGCGATGAATGAAACACTAAAGCAGAATCGTCTTTTGAGGGAGCAGAGGGATGATCCATCCTTCTCACATTCTCCAACTGATAGAAGTAGTGGTGGTAATCTTCAGAAAAATGTTTCAAATTTCCATCTTGGTCATGATGAAAGATCTGCTTTATATTCTCTTAAGCATGACCATGAAACTTCTCAAAAGGCAATGTCATTACCCTCTTCACCACATGAATATAGGGGTGAAGCATCTGGGAGAAGTGGACCATCAGGATATGGAGTAAGTAATGAGCTCCAAGCAACATGGAACAAAGTCCTCGAGTCGCCGATGTTCAATAATAAACCTCTGTTACCATATGAAGAATGGAATATTGACTTCTCAGAACTAACTGTTGGAACTCGTGTTGGGATTGGGTTCTTTGGAGAAGTATTCCGAGGCATATGGAATGGTACAGATGTTGCCATAAAGGTTTTTCTGGAGCAAGATTTGACGACTGAAAACATGGAAGATTTCTGCAACGAGATAACAATTCTCAGCCGGCTTCGACATCCTAATGGTACACATCATCTACTTACTATTCTTATTTTATTTCTTGGTGCATGCACAAAGCCTCCACATTTGTCAATGGTTACTGAGTATATGGAGATGGGATCTTTGTATTACTTGATCCATTCGAGTGGTCAAAATAAGAAGCTTAGTTGGCGGAGAAGACTCAAGATGTTACGGGATATATGCAAGGGGTTGATGTGCATACATCGAATGAAGATAGTTCACCGTGACCTGAAAAGTGCCAATTGTCTTGTAAATAAGCATTGGACTGTGAAGATCTGTGATTTTGGGCTTTCAAGAATAATGACAGATTCTCCCATCAAAGATTCTTCAACGGCGGGAACTCCTGAGTGGATGGCTCCTGAACTTACTCGAAATGAACCATTCACGGAAAAGTGTGACATCTTTAGCCTCGGGGTGATAATGTGGGAGCTTTGCACTTTAAATAGGCCCTGGGAAGGCGTACCGCCAGAGAGGGTAGTTTATGCCGTTGCTAACGAGGGATCCAGACTGGAGATTCCTGAAGGTCCACTGGGCAGGCTGATTTCAGATTGTTGGGCAGAACCTCATGAAAGGCCAAGTTGTGAAGACATCCTTTCTCGTTTGCTTGACTGCGAATACTCGTTGTGCTAA 2592 0.4325 MLVSQPLLLAGCRRAVPRTISPCTSYDLQLEASGATEDMAETREDSGPAGQGPSNASWWTSDFIEKFGSVSLGSQDEALNNKESPRYSEQGDFSPYRASQILWRTGMLSEPIPNGFYSVIPEKRLKELFHNIPTLEELLALGGEGFRADIILVDSEKDKRLSMLKQLALALVKGLNSNPAAVIKKIAGLVSDFYKRQNVESPAKAALEEASHMFENLSVQLLGQIKHGSCRPRAILFKVLADTVGLESKLMVGLPNDGVPECADSYKHLSVVVVLNSVELLVDLMRFPGQLYPQSTKAIFMTHISAAGESDSAENDSCDSPLEPNSPLYGVSERVDIDSAEREENLLFHRRHEASSNLSGISLRNSMLRSNVILDNKLSLSHSEPNIATAFGRRSRRRVIAEQRTASSSPEHPSFRARARSMLSGDRKTFRDFADDRATSSYRSDGAPSSEARRIRRRSISITPEIGDDIVRAVRAMNETLKQNRLLREQRDDPSFSHSPTDRSSGGNLQKNVSNFHLGHDERSALYSLKHDHETSQKAMSLPSSPHEYRGEASGRSGPSGYGVSNELQATWNKVLESPMFNNKPLLPYEEWNIDFSELTVGTRVGIGFFGEVFRGIWNGTDVAIKVFLEQDLTTENMEDFCNEITILSRLRHPNGTHHLLTILILFLGACTKPPHLSMVTEYMEMGSLYYLIHSSGQNKKLSWRRRLKMLRDICKGLMCIHRMKIVHRDLKSANCLVNKHWTVKICDFGLSRIMTDSPIKDSSTAGTPEWMAPELTRNEPFTEKCDIFSLGVIMWELCTLNRPWEGVPPERVVYAVANEGSRLEIPEGPLGRLISDCWAEPHERPSCEDILSRLLDCEYSLC 863
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0544 863 MobiDBLite consensus disorder prediction 482 498 - -
Lele12g0544 863 MobiDBLite consensus disorder prediction 499 514 - -
Lele12g0544 863 Pfam Ethylene-responsive protein kinase Le-CTR1 97 291 - -
Lele12g0544 863 MobiDBLite consensus disorder prediction 532 562 - -
Lele12g0544 863 ProSitePatterns Serine/Threonine protein kinases active-site signature. 726 738 IPR008271 GO:0004672|GO:0006468
Lele12g0544 863 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 372 855 - -
Lele12g0544 863 MobiDBLite consensus disorder prediction 35 56 - -
Lele12g0544 863 Gene3D Transferase(Phosphotransferase) domain 1 686 861 - -
Lele12g0544 863 SUPERFAMILY Protein kinase-like (PK-like) 573 855 IPR011009 -
Lele12g0544 863 ProSitePatterns Protein kinases ATP-binding region signature. 605 626 IPR017441 GO:0005524
Lele12g0544 863 MobiDBLite consensus disorder prediction 482 514 - -
Lele12g0544 863 MobiDBLite consensus disorder prediction 400 456 - -
Lele12g0544 863 Gene3D Phosphorylase Kinase; domain 1 590 685 - -
Lele12g0544 863 MobiDBLite consensus disorder prediction 421 439 - -
Lele12g0544 863 Pfam Protein tyrosine and serine/threonine kinase 600 855 IPR001245 GO:0004672|GO:0006468
Lele12g0544 863 CDD STKc_MAP3K-like 605 855 - -
Lele12g0544 863 ProSiteProfiles Protein kinase domain profile. 599 862 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0544 863 SMART serkin_6 599 856 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0544 863 FunFam Serine/threonine-protein kinase isoform 1 589 685 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0544 Lele-ChrLele12 13764483 13781834 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0544 39 863 MAP Kinase Kinase Kinase AT3G58640 70.133 0.0 1179
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL_CTR1-DRK-1 Lele12g0544 PK_Tyr_Ser-Thr 1.7e-56 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0544 12 13764483 13781834 Lele12g0544 12 13764483 13781834 ECH
Lele09g0793 09 6270833 6279369 Lele12g0544 12 13764483 13781834 hybridization
Lele10g0721 10 5503670 5518173 Lele12g0544 12 13764483 13781834 hybridization