Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0528 ATGGGCATGAAGAGCACAGGAGGAGAGATAGTTCAGGTTCAAGGAGGCCACATTGTTCGATCCACTGGTAGAAAAGACCGTCACAGCAAAGTTTACACTGCAAAAGGCCCTCGTGACCGTAGGGTTCGTCTCTCAGCTCATACCGCCATTCAATTCTACGATGTTCAAGACCGTCTCGGCTATGACCGGCCCAGCAAAGCCGTGGATTGGCTAATCAAGAAGGCAAAATCTGCCATTGACAAGCTCGCAGAGCTTCCTCCATGGCATCCAGCTACTACTAATACTGAAGAAGCTCCTGAAACAGGAATTGCAGAGGAAACAGAATCTTCTAGTTACAACATTCAGCTTCAGAGGCAGTTTGGTGAGAACCCACATAACCACCATTCTGCTTTCATTTCGTCGCAGATGGGAACTGATGCCATAGCTTTCTTCCCCACCACCACAGCTACTATGAGTTCCTCCATCAATTTTCAGAACTACCCAGGTGACATAATCTCCAGAACTACCAACCCCAATGAAGATCTTGGACTTTCTCTTCATTCGTTTCAAGACCCAGGTCTGATTCATGGCCAATCATCACAAGGAGACGCGAATCCTGCAGGATTTGTTACTTGGAACAACGAACCTTCTATGTTAGTGGAGCAAGGTTCGGCATTTTCTCAAAGGGGGACCCTTCAGTCCAGTTTTTCAGCATGGAATGACATTGCAATGACTTGTTCTTCTTCGGAGCAACAGAACAAGTCCCAAGCTTCAATCTTTGGAAGCAGGTTTCTGTCTGATGGAATGGGAATTCCTGGATTCTGCATTCCAGCAAGATTTCAAGTGTTCCATCCTTATCCATCAGGAGTATCTCTGTTATTCACCAGAATTGCAACAAAGTGA 882 0.4615 MGMKSTGGEIVQVQGGHIVRSTGRKDRHSKVYTAKGPRDRRVRLSAHTAIQFYDVQDRLGYDRPSKAVDWLIKKAKSAIDKLAELPPWHPATTNTEEAPETGIAEETESSSYNIQLQRQFGENPHNHHSAFISSQMGTDAIAFFPTTTATMSSSINFQNYPGDIISRTTNPNEDLGLSLHSFQDPGLIHGQSSQGDANPAGFVTWNNEPSMLVEQGSAFSQRGTLQSSFSAWNDIAMTCSSSEQQNKSQASIFGSRFLSDGMGIPGFCIPARFQVFHPYPSGVSLLFTRIATK 293
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0528 293 MobiDBLite consensus disorder prediction 87 107 - -
Lele12g0528 293 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 19 236 IPR005333 GO:0003700
Lele12g0528 293 ProSiteProfiles TCP domain profile. 24 82 IPR017887 -
Lele12g0528 293 Pfam TCP family transcription factor 23 127 IPR017887 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0528 Lele-ChrLele12 13566232 13567430 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0528 8 274 TCP Transcription Factor Family AT3G15030 39.733 2.14e-62 201
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Lele12g0528 TCP 1.2e-32 No_clan
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0528 12 13566232 13567430 Lele12g0528 12 13566232 13567430 ECH
Lele09g0812 09 6470313 6471203 Lele12g0528 12 13566232 13567430 hybridization
Lele10g0740 10 5710735 5711628 Lele12g0528 12 13566232 13567430 hybridization