Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0522 ATGGACGATAGTTCTGAGAACAAATATGGATCTTCCTCTGACCCATCCATGAAAAATAAGGTGAAACAATTGGTTGATGATCTTCAAGGAATCTTCACCAAGCTTCGATCTGCAAGAGAAGAGAATAGGTCTAATGATATAGTTATCTTTGAGGAGAAGGTGTATCATACGCTCCAGGAGTGGAAAACAGAATTAAACAAGCCATCTCCAGCTTCTTCCTTAGCTGATGGAAATCTTGGATTATTTTCAGAGGAATTGGCCCAACTTTTGCAAGATATTGAGGAGGAAGAAGATGCCACTAGTGAACTGGCAAAGAGTGCACCATTGAAGACTGAGCCAGATCTTCATAACACCAATGAAACCAGTTATTCATCATTTCAGGAATGTTCTGATGAGAACCAACAAGGTCATGCTCTGGAAGACTTTTACCAAGATGAAGTGGCTACTTCAACTCCAAAGAGCCAAAATGCTGCTGTTAATAGCTTAGATATGATTACTCAATCAGATAACCATGAACCCAGTTTAAATCAAGATGTAAATTACTTCATAGGAGGGCATAAATCTGATTTGATTGAACAATGTGATATATATCAGGAATACAGGCAAAACTCAGCAATAAAAAGCACAGAGCCGGATCTATTTATTTTAGATGAGGATTTTGATTGGAATGTGTTTGTTGGACCTGATGATGTCCAACAGTCTGGAGAGGATATTTCGCCTAATGTTCTTCCAAATATATGCCCTCCGCCTTCTGCATTTTTAGGCCCAAAATGTGCCTTATGGGATTGCTTTAGGCCGGCTCAAGGGTTAAAATGTTGCCAGGACTACTGCTGTAGTTCTCATGAGCTTTTGGCTAACAAAGAGGGTCTTCCTGGCATGACTCCAATTTTGCGTCCTCGGGGCATTGGTGTTAAGGATGGTCCTTTGTTTGCTGCTGTTAATGCGAAGATACTGGGTAAGGAGGTGGGCATCCCTAATTGTGAAGGTGCTGCTTCAACCAAATCCCCCTGGAATGCTCCTGAGTTATTTGATCTTTCTCTTTTCGAGGGTGAAACTGTGCGGGAATGGCTTTTTTTTGACATGCCAAGAAGGGCTTTTGGCAATGGAAATAGAAAACAAAGATCACTCCCAGATTACAGCGGACGTGGTTGGCATGAATCAAGGAAGCAAGTGATGAAGGAATATGGGGGACAGAAGAGGTCCTATTACATGGACCCTCAGCCTCTGAGTTATCTTGAGTGGCATTTGTATGAATATGCGGTCGATAAGCATGATGGGTACGCATTATACAGACTTGAATTAAAGCTTGTGGATAAAAAGAAGAGTCCTAAAGGAAAAGTGACCAAGGAATCTCTTGCTGATATACAGAACAAGATGGGAAAGCTAACGGCCGATGTTCCAGAAAAAAAAAATGACTGCAGATCCTATTTGAAGGATAACCGATGA 1446 0.4136 MDDSSENKYGSSSDPSMKNKVKQLVDDLQGIFTKLRSAREENRSNDIVIFEEKVYHTLQEWKTELNKPSPASSLADGNLGLFSEELAQLLQDIEEEEDATSELAKSAPLKTEPDLHNTNETSYSSFQECSDENQQGHALEDFYQDEVATSTPKSQNAAVNSLDMITQSDNHEPSLNQDVNYFIGGHKSDLIEQCDIYQEYRQNSAIKSTEPDLFILDEDFDWNVFVGPDDVQQSGEDISPNVLPNICPPPSAFLGPKCALWDCFRPAQGLKCCQDYCCSSHELLANKEGLPGMTPILRPRGIGVKDGPLFAAVNAKILGKEVGIPNCEGAASTKSPWNAPELFDLSLFEGETVREWLFFDMPRRAFGNGNRKQRSLPDYSGRGWHESRKQVMKEYGGQKRSYYMDPQPLSYLEWHLYEYAVDKHDGYALYRLELKLVDKKKSPKGKVTKESLADIQNKMGKLTADVPEKKNDCRSYLKDNR 481
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0522 481 MobiDBLite consensus disorder prediction 1 21 - -
Lele12g0522 481 MobiDBLite consensus disorder prediction 112 131 - -
Lele12g0522 481 PANTHER TRANSCRIPTION FACTOR VOZ1 1 474 IPR039277 GO:0006355|GO:0048578
Lele12g0522 481 Coils Coil 79 106 - -
Lele12g0522 481 MobiDBLite consensus disorder prediction 94 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0522 Lele-ChrLele12 13508155 13510972 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0522 11 467 VOZ-9 Transcription Factor Family AT1G28520 51.299 2.65e-149 433
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF VOZ Lele12g0522 None None None