Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0512 ATGACTCAGTGCAATGGCTCTGAAAATAATATCATCGTCGACAAGCGCAAAGACAGCTTAATCACAACATGCCCTTCCTGTGGACATCGTATCAAATCCCACGAACATGCTGGGATCCATGACTTGCCTGGGCTGCCTTCTGGAGTGAAGTTTGATCCGACAGATCAAGAGATTCTTGAACATTTGGAAGCAAAAGTTCGATCTGATATTCATAAGCTTCATCCACTGATTGATGAGTTCATCCCTACTCTTGAAGGCGAGAATGGAATCTGCTATACTCATCCTGAGAAGCTTCCAGGTCATTCATTCATCAATTCATCATTAAACTATCCGAAATGA 339 0.4248 MTQCNGSENNIIVDKRKDSLITTCPSCGHRIKSHEHAGIHDLPGLPSGVKFDPTDQEILEHLEAKVRSDIHKLHPLIDEFIPTLEGENGICYTHPEKLPGHSFINSSLNYPK 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0512 112 SUPERFAMILY NAC domain 39 106 IPR036093 GO:0003677|GO:0006355
Lele12g0512 112 Pfam No apical meristem (NAM) protein 46 103 IPR003441 GO:0003677|GO:0006355
Lele12g0512 112 ProSiteProfiles NAC domain profile. 45 112 IPR003441 GO:0003677|GO:0006355
Lele12g0512 112 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 19 101 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0512 Lele-ChrLele12 13338611 13340309 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0512 23 100 NAC Transcription Factor Family AT4G28500 83.333 4.59e-44 143