Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0498 ATGAGATCACGTGCTTCAAAGTCAAAGGTTTCTTATTTATACACCTGTCCTCTCTCTCCTATGATCTTCATTTTCTTTCTCTCTCTAGACTCTCAGAATTCCTCTTACAATAACACCATGATTGGCAGAGAAATCCTCGTCAAGATGAAGGCCAAGGCTGGGTTTGGGACATCAGCAAGTGACACAGGGAAAGGAAAAAGCAAAATGTCAAATTATATAACACATGGTTTTCACTTAATGAAGGGAAAATCAGGGCATGCTATGGAAGATTATCTAGTTTCAGAATTTAAACAAGAAAAGGACAAAGAGTTAGGGTTATTTGCTATATTTGATGGCCATTTGGGTCATGATGTTGCAAGCTATTTGCAGAACCACCTTTTTGACAACATCTTGAAACAGCCTGACTTCTGGAATGACCCAGAAAGTGCAGTAAGGAGAGCTTATCTTACAACAGACGAGAAAATACTGGAACAAGCACTTGTGTTGGGACGAGGAGGATCAACTGCTGTAACTGCAATTCTTATTAATGGACGGAAGCTCATAGTAGGGAATGTCGGAGACTCTCGAGCTGTAATTTGCAAGAATGGAATGGCAGAGCAACTATCAGTTGATCACGAACCAAGCAGGGAAAAAAGATTGATCGAGAGCCGGGGTGGTTTTGTTTCAAACATTCCAGGCGATGTGCCTCGTGTTGATGGGCAGCTAGCAGTAGCCAGGGCTTTTGGCGATAAGAGCTTGAAGATGCATCTTAGTTCAGAACCTGATGTGGTGATAAAGGACATAGATGATGAAACAGAATTCCTTATTCTAGCAAGTGATGGTATATGGAAGGTTGTGTCAAACCAAGAAGCTGTGGAGTGTATTAGACAAATAAAGGATGCTCAATCTGCAGCGAAGCGTTTGATAGATGAGGCGGTTGCAAGGAAGAGTAAGGATGACATATCCTGCATTGTTGTGAGGTTCCAATGA 969 0.418 MRSRASKSKVSYLYTCPLSPMIFIFFLSLDSQNSSYNNTMIGREILVKMKAKAGFGTSASDTGKGKSKMSNYITHGFHLMKGKSGHAMEDYLVSEFKQEKDKELGLFAIFDGHLGHDVASYLQNHLFDNILKQPDFWNDPESAVRRAYLTTDEKILEQALVLGRGGSTAVTAILINGRKLIVGNVGDSRAVICKNGMAEQLSVDHEPSREKRLIESRGGFVSNIPGDVPRVDGQLAVARAFGDKSLKMHLSSEPDVVIKDIDDETEFLILASDGIWKVVSNQEAVECIRQIKDAQSAAKRLIDEAVARKSKDDISCIVVRFQ 322
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0498 322 Pfam Protein phosphatase 2C 86 314 IPR001932 -
Lele12g0498 322 SMART PP2C_4 64 319 IPR001932 -
Lele12g0498 322 FunFam Probable protein phosphatase 2C 39 64 322 - -
Lele12g0498 322 ProSiteProfiles PPM-type phosphatase domain profile. 74 321 IPR001932 -
Lele12g0498 322 Gene3D - 68 322 IPR036457 -
Lele12g0498 322 CDD PP2Cc 75 321 IPR001932 -
Lele12g0498 322 PANTHER PROTEIN PHOSPHATASE 62 321 - -
Lele12g0498 322 Coils Coil 284 304 - -
Lele12g0498 322 SUPERFAMILY PP2C-like 69 321 IPR036457 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0498 Lele-ChrLele12 13130665 13132813 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0498 40 322 PP2C-type Phosphatase Gene Family AT3G15260 69.550 7.29e-145 408