Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0497 ATGGGTGATATTAAACCGAAGACGGTGGTGAAGAGGGATGCCTTGGGGTTGGGGGATTACGAGGAGAAGAAAAATGGATCCTTGCTGTTTGGGGAAGATGACCAGAGGAAGAAAGTGACCGTGAAGAAAGGGTCTGCGGGCGGCGGAGGGGGAGGAGGAGGAGGAGGAAGTGGTATGCGGTGTTGCCAGGCGGAGAACTGCACGGCGGAGCTGAGTGATGCGAAGCCGTATCATAAGAGGCACAAGGTGTGTGAATATCATGCCAAGGCTCAGGAAGTAATCGTTTGTGGCATACGACAACGTTTTTGTCAGCAATGCAGCAGATTCCATGAGTTGGGTGAATTTGATGAGAAGAAGAGAAGTTGCAGGGGGCGATTGGCAGGGCATAATGAACGAAGAAGGAAGAGTTCAGTGGGTGAGAATCAAGGAGAAGGGTCGAGCCAGAAAAGAACAGGGATGAAGGACAGGGATGAAAGAGCCAGAATTCAGATCACTATATAA 501 0.505 MGDIKPKTVVKRDALGLGDYEEKKNGSLLFGEDDQRKKVTVKKGSAGGGGGGGGGGSGMRCCQAENCTAELSDAKPYHKRHKVCEYHAKAQEVIVCGIRQRFCQQCSRFHELGEFDEKKRSCRGRLAGHNERRRKSSVGENQGEGSSQKRTGMKDRDERARIQITI 166
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0497 166 SUPERFAMILY SBT domain 60 138 IPR036893 GO:0003677|GO:0005634
Lele12g0497 166 ProSiteProfiles Zinc finger SBP-type profile. 59 136 IPR004333 GO:0003677
Lele12g0497 166 MobiDBLite consensus disorder prediction 123 166 - -
Lele12g0497 166 MobiDBLite consensus disorder prediction 149 166 - -
Lele12g0497 166 Pfam SBP domain 62 135 IPR004333 GO:0003677
Lele12g0497 166 PANTHER SQUAMOSA PROMOTER-BINDING-LIKE PROTEIN 4 42 146 IPR044817 GO:0003677
Lele12g0497 166 FunFam Squamosa promoter-binding-like protein 14 54 123 - -
Lele12g0497 166 Gene3D - 52 123 IPR036893 GO:0003677|GO:0005634
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0497 Lele-ChrLele12 13108797 13109466 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0497 48 164 SBP-box Gene Family AT1G53160 55.833 7.10e-40 131
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF SBP Lele12g0497 SBP 2.5e-30 No_clan