Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0491 ATGTTCACATGGCTTCTTTTCTCGCCATCATCTCAAGCACGCGAGTTGCCGGAGGCAAAGGTGGCTGGGAACCAAGCCTTTAGAAGACTACAATCACCGGGCTCAAAGGATGAGATTTTAAGTACCATGCAGAAAGGATCTGATTTGGTTTTGTTGGTGAAGAAGGAGGATTATGATTCGTTCAACACGAAAAATCCGTTGCAGAAGATGGAAGATGTATATTCGTCTTTCGTTCTTAATAGGTCGGGTCCCTTCTACTTCATCAGGGGGAAATCTGAGCGTTGCCAAAAGGGTCAAAAACTAATCGTCCTAGTTATGGCAGTGAGAGACAAGCCTTATCATCGTCCATCGCATACTCCGGCACCATCTCCGGCAGCCAATACACCGAAAGCCGCCTCGCCAGCTCCTTCCCTGTCGGCGATTTCAGGCTCAGTTCTGAGGCTTGGTGGTTCGGTAGTGGGAATATTGGCTTTTGGGGTTAGCATTGGGATGAGCTTGATCTTTGGGAGCATTGGTGAATTCATCGTCGTCGTCAGCGACATTAAGATGAAGATCAATGGCCTTGTCATCATGTTGTTAGCGTTGGCGTTGGCGTCATCGGCCGTGTCGAAATCGGAATCATTTAGCATATTTGAGAGGCCACAACAAGAAGCAGTATGCAATGGATTACAAGGAGAATGCTACGACGACGGCGACCACAACATGGAAGGAATGTCATTCATGATGAGATCTGCTGGTAAGACAAGATCATCAAGGAACCTTAGAACTGTGAATTTTATAAGCTACGATGCTCTTAAGAAGGATAATATTCCATGCGGCCAACGTGGACGTTCTTATTATGATTGCAACCACCGTGGCAAGGCCAATCCTTATAGACGTGGTTGCAGCGCCATTACACTTTGCGCCAGAAAAACAGATTGA 921 0.4669 MFTWLLFSPSSQARELPEAKVAGNQAFRRLQSPGSKDEILSTMQKGSDLVLLVKKEDYDSFNTKNPLQKMEDVYSSFVLNRSGPFYFIRGKSERCQKGQKLIVLVMAVRDKPYHRPSHTPAPSPAANTPKAASPAPSLSAISGSVLRLGGSVVGILAFGVSIGMSLIFGSIGEFIVVVSDIKMKINGLVIMLLALALASSAVSKSESFSIFERPQQEAVCNGLQGECYDDGDHNMEGMSFMMRSAGKTRSSRNLRTVNFISYDALKKDNIPCGQRGRSYYDCNHRGKANPYRRGCSAITLCARKTD 306
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0491 306 Pfam Rapid ALkalinization Factor (RALF) 240 303 IPR008801 -
Lele12g0491 306 SUPERFAMILY Cupredoxins 44 105 IPR008972 -
Lele12g0491 306 Gene3D - 25 109 IPR008972 -
Lele12g0491 306 MobiDBLite consensus disorder prediction 114 133 - -
Lele12g0491 306 ProSiteProfiles Phytocyanin domain profile. 1 107 IPR003245 GO:0009055
Lele12g0491 306 PANTHER RAPID ALKALINIZATION FACTOR-LIKE 189 303 - -
Lele12g0491 306 Pfam Plastocyanin-like domain 42 99 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0491 Lele-ChrLele12 13055922 13059800 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0491 36 123 Phytocyanin Superfamily AT5G53870 48.864 1.03e-20 89.4