Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0485 ATGGCTTCTCGGATCTTCTTCTTCGTCCTCCTCTTCACTTCAGTCTCATCCACTGAATTTGTGTATAATAGAGACTTCAATTCCACCAACATCGTCCTCTCCGGCAATGCCACCATCCAAAACTCTGTTCTCACTCTTACCAACCAGACCTTCTTCTCCATTGGACGCGCTTTTTATCCTTACAAAATACCCACGAATTCTCCCAAATCTTCAACCCCTCTTGCCTTTGCGACCTCCTTCATCTTCTCCGTTGCTCCCTGTAAGGGCTTTCCCACTGCTCATGGCTTCGCTTTTGTGCTCTCACCTGTAATGGGTATCACTAGGGCAACATCAGGGAACTATCTGGGTATTTTCAATCGCACCAACGACGGTGATTCTTCCAACCATATTTTTGGTATCGAATTCGATGATTTTAGAAACGAAGAATTCAATGATATTAATGATAATCACGTGGGTGTGGATTTGAATTCGCTTATTTCCTTGTATTCACAACCTGCTGGTTTCTGGGATGGAGATCAATTACAGGAATTGAAACTGGATAGTGGGGAGAACTATCAGGTGTGGATTGAATTTCTGGATTTACATCTCAATGTTACTATGGCCCCAGCAGGAAAACCAAAGCCTCAAAAGCCATTGATTAGTAAGCATGTTAACCTTTCTGGTGTCCTGTTAAACGAAATGTATGTTGGGTTCTCTGGAGCAACAGGAAGAATGGTAGACATATGTAGAATCTTAGCTTGGAGTTTTAGCAATTCCAACTTTTCAATTGGTGATGCTTTGATTACAAGAAATTTGCCCAATTATGTGCATACAAAGGAATTAATGGTTAGATCAAAAGGGTTCATTGCAGGAGTTACTTTGGGTTCTCTTCTTGTCATTTGCTGCTGCACTTTTGCGTTCTTCAGTTTACCTAAAACCACAAAAAAAGGGAAAGATGATGAAGAGAAGAACATTGAAGATTGGGAATTAGAGTATTGGCCACACAGAATTAGCTACCAACATATTCATGATGTTACAGGGGGATTCTCGGAAGAAAATGTGATTGGGAGTGGAACAAGTGGGACAGTATATAAAGGAATTCTACAAGGAGTTCAAGTGGCAGTGAAGAGAATCCACCATGGCACTCAATACGGAATGAGAGAATTTTTGGCTGAGATTTCAAGCTTAGGCAGGATGAAACACAAGAATTTAGTAGGTTTCAGAGGCTGGTGTAAAAGAAAAGGGGGAAACTTGATTCTGGTTTATGATTACATGGAGAATGGAAGCTTAGACAAAAGGATTTTTGAGCGTGAAGATAATAGCATGCTGCTGAGCTGGGAACAACGTAAAACGGTTTTACAAAACGTAGCTTGTGGGATTTTATACCTACATGAAGGTTGGGAAGTTGAGGTATTACACAGAGACATCAAAGCAGGCAACGTGCTGCTCGATAAAGATATGAACGCCAGATTAGGGGATTTCGGCCTAGCCAGATTGCATCACCAAGAACAATTGGCTGAGACAACGAGAGTAATTGGAACTCTTGGGTATATGGCACCAGAACTAGTTAGAATCGGGCGACCATCGACAGCAACCGATGTGTATAGCTTTGGCATTCTCATTTTAGAAGTTCTTTGCGGGCGAAGACCTTTCGTATCTGATAAGCCATCATTGATTGACTGGGTTACGAGCCTAATGGAGAATGATAACTTGTGTAGTGCTCTTGATGAACGTTTGAAGGCTCAAGGTGGGTTCAACAAAGGGGAAGTTGAGAGATTGCTTCATCTGGGTTTGATTTGTTCCAGTTTAGAACCTAAAGTTAGACCAACAATGCGACAAGTGGTGAAAGCATTGGAGAAAATTGGCGAAACTGAGTGTGATGAAGAGTGTTTTGATGGGAACTTGCATGAGAAAATAAACTCAGCAGCAATGTGGTCTAAGCATTCTTCAAATTCTACTGAGAAAACTTATCCAACTTTTGAGGAAATTATGCACTCCAAATATTATACCACAACTACTATTAGTGGTTCTTATTATTCCCTTCCACCATCAGAAGAAGCCTACGTTTCAGAAGGAAGGTGA 2061 0.4124 MASRIFFFVLLFTSVSSTEFVYNRDFNSTNIVLSGNATIQNSVLTLTNQTFFSIGRAFYPYKIPTNSPKSSTPLAFATSFIFSVAPCKGFPTAHGFAFVLSPVMGITRATSGNYLGIFNRTNDGDSSNHIFGIEFDDFRNEEFNDINDNHVGVDLNSLISLYSQPAGFWDGDQLQELKLDSGENYQVWIEFLDLHLNVTMAPAGKPKPQKPLISKHVNLSGVLLNEMYVGFSGATGRMVDICRILAWSFSNSNFSIGDALITRNLPNYVHTKELMVRSKGFIAGVTLGSLLVICCCTFAFFSLPKTTKKGKDDEEKNIEDWELEYWPHRISYQHIHDVTGGFSEENVIGSGTSGTVYKGILQGVQVAVKRIHHGTQYGMREFLAEISSLGRMKHKNLVGFRGWCKRKGGNLILVYDYMENGSLDKRIFEREDNSMLLSWEQRKTVLQNVACGILYLHEGWEVEVLHRDIKAGNVLLDKDMNARLGDFGLARLHHQEQLAETTRVIGTLGYMAPELVRIGRPSTATDVYSFGILILEVLCGRRPFVSDKPSLIDWVTSLMENDNLCSALDERLKAQGGFNKGEVERLLHLGLICSSLEPKVRPTMRQVVKALEKIGETECDEECFDGNLHEKINSAAMWSKHSSNSTEKTYPTFEEIMHSKYYTTTTISGSYYSLPPSEEAYVSEGR 686
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0485 686 ProSiteProfiles Protein kinase domain profile. 342 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0485 686 Gene3D - 16 261 - -
Lele12g0485 686 Pfam Legume lectin domain 18 253 IPR001220 GO:0030246
Lele12g0485 686 FunFam Putative L-type lectin-domain containing receptor kinase VII.2 305 417 - -
Lele12g0485 686 CDD lectin_legume_LecRK_Arcelin_ConA 18 252 IPR001220 GO:0030246
Lele12g0485 686 Gene3D Transferase(Phosphotransferase) domain 1 418 625 - -
Lele12g0485 686 Gene3D Phosphorylase Kinase; domain 1 304 417 - -
Lele12g0485 686 PANTHER - 34 613 - -
Lele12g0485 686 FunFam L-type lectin-domain containing receptor kinase S.4 16 257 - -
Lele12g0485 686 Pfam Protein kinase domain 343 609 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0485 686 FunFam L-type lectin-domain containing receptor kinase S.4 418 623 - -
Lele12g0485 686 SMART serkin_6 342 611 IPR000719 GO:0004672|GO:0005524|GO:0006468
Lele12g0485 686 CDD STKc_IRAK 348 614 - -
Lele12g0485 686 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Lele12g0485 686 SUPERFAMILY Concanavalin A-like lectins/glucanases 16 254 IPR013320 -
Lele12g0485 686 ProSitePatterns Protein kinases ATP-binding region signature. 348 369 IPR017441 GO:0005524
Lele12g0485 686 SUPERFAMILY Protein kinase-like (PK-like) 318 612 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0485 Lele-ChrLele12 12829432 12831492 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0485 15 567 Receptor kinase-like Gene Family AT4G04960 54.011 0.0 576
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Lele12g0485 Pkinase 2.1e-46 CL0016