Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0480 ATGGAGCCTTTGCTGAAAGGCGAAAGCAGTGGTCAGAGGATGCGGTCGCCGGCGTTATTCCATCGTCGCTCACATGCTATCGCTTACGGCTCGCCCTCCGTAAAAGCGGCTGCCCTTGTGGATCTGGCTGAAGATGGCGTCGGCATCCCAGAGCAAATACTCGATTCATCGGAATTTCAGAGTTCCGCTAGATTTTACTTTATATTTACTAAATTAAACTTTATATGGTCACTTGGTTACTTTGCCCTGCTAATCCTGAATTTCCTTGAGAAACCCTTGTGGTGTGAAAAGTATACCACTTATTCTTGCGACGATAGAGTGTATTTCTTCCTGGGACAGCTGCCATATCTAACTGGTGCAGAATGTGTTATTTATGAGGGTATAACTCTTCTTGTGCTTATTGTGCATACCTTTTTCCCGATATCCTATGAAGGCTCCCGTATATATTGGAAAAAAATTGTTAATCAATTGAAGGTATTGTGTCTGTTAGTTCTGGTTGCTGATATGGTGGTTTATGCTCTGTATTTGTCTCCAGTGACTGTTTATTCTCTACCTGTCAGATTTGCACCTTATGTCAGAGTTGTTCTTTTCATTTTACATATTAGGGAATTACGAGCAACAATTACCATCTTGGCTGGAATGCTTGGCACATACCTGAATGTCCTGGCTTTGGGGCTTCTGTTTCTTCTTTTCTCAAGTTGGGTAGCCTATGTGATGTTTGAAGATACACAACAGGGGAAAATAGTATTCACTTCCTATGGCACCACGTTATATCAGATGTTTGTTTTATTTACCACGTCTAATAATCCAGATGTTTGGATTCCTGCATACAAGGCTTCACGTTGGTATTGCCTATTTTTTGTTCTCTTTGTGCTTTTGGGGGTTTACTTTGTCACGAACTTGGTCCTTGCTGTTGTTTATGACAGTTTCAAGAGTGAGCTTGCAAAACAAGTTTCTGAGATGGATCGAATGAGAAAAAATATGTTGGGGAAAGCATTTGATCTATTAGATAATAATCATATTGGGCATCTAAACAAAGGCCAATGCATTGAACTGTTCCATGAGCTGAACAAGTACAGGACTTTGCCAAAGATTTCCAGAGAAGAATTTGAGTTGATATTTGATGAGCTGGACGATAGTCGTGATGTAAAGATCAACAAGGATGAATTTGCTGATATTTGCAATGCCATTGCTTTCAAGTTCCAGAAGGAGGATAGTCTATCTTACTTTGAGTATCTTCCATTCTACCACGCTCCTATCTCCAAGGAGTTCAAAGCATTTGTACGGAGCCTGACGTTTGGATACCTAATATCCTTCATTCTTATATTGAATCTGATTGCTGTTATAATTGAGACAACGCTTGATATACAAAATAATTCTGCTCAAAAGGTTTGGCAAGTGGTTGAATTTGGTTTTGGGTGGATATATGTAATAGAAATGGCTTTAAAAGTTTATGCATATGGATTCGAGAATTATTGGCGGGATGGTCAGAATCGTTTTGACTTCGTGATCACATGGGTAATTGTCATTGGAGAAACTATAACTTTTGCTACACCTGATGGACAGGATTTTTTCTCAAATGGAGAATGGATTCGGTACCTTCTTCTTGCAAGAATGTTGAGGTTGATAAGGCTCCTAATGCATGTCCCGCAATACCGAGCCTTTGTGGCAACCTTCTTAACTCTCATACCGAGTTTGATGCCATACCTTGGAACCATATTTTGTGTGTTATGTATTTATTGCTCCCTCGGCGTACAGATCTTTGGAGGAATTGTCAATGCTGGAAATCCCAAATTGGAAGCAACAGATCTTGCTGACAATGACTATCTGATCTTCAATTTTAATGATTACCCAAATGGAATGGTCACACTTTTCAATTTGCTAGTCATGGGAAACTGGCAAGTATGGATGCAGAGCTACAAGGAATTAACAGGGACTTCTTGGACCTATATTTACTTTATCAGCTTCTACTTAATAACTGTTCTGCTGCTTTTGAATTTGGTTGTTGCTTTTGTCTTGGAGGCATTCTTTGCTGAAATGGAGCTCGAGACGTCTGCTGATACTGGCGAAGAAGATGACAAGGAAACTGAAGGAGAGAAACGTCGAAGACGACGTATTGGAACCAAAACACGTAGCCAAAGGGTTGATGCTCTACTTCATCATATGTTGAGCTCTGAGTTATGTCAAGCACAGCCTTCCGATCCATAA 2208 0.4022 MEPLLKGESSGQRMRSPALFHRRSHAIAYGSPSVKAAALVDLAEDGVGIPEQILDSSEFQSSARFYFIFTKLNFIWSLGYFALLILNFLEKPLWCEKYTTYSCDDRVYFFLGQLPYLTGAECVIYEGITLLVLIVHTFFPISYEGSRIYWKKIVNQLKVLCLLVLVADMVVYALYLSPVTVYSLPVRFAPYVRVVLFILHIRELRATITILAGMLGTYLNVLALGLLFLLFSSWVAYVMFEDTQQGKIVFTSYGTTLYQMFVLFTTSNNPDVWIPAYKASRWYCLFFVLFVLLGVYFVTNLVLAVVYDSFKSELAKQVSEMDRMRKNMLGKAFDLLDNNHIGHLNKGQCIELFHELNKYRTLPKISREEFELIFDELDDSRDVKINKDEFADICNAIAFKFQKEDSLSYFEYLPFYHAPISKEFKAFVRSLTFGYLISFILILNLIAVIIETTLDIQNNSAQKVWQVVEFGFGWIYVIEMALKVYAYGFENYWRDGQNRFDFVITWVIVIGETITFATPDGQDFFSNGEWIRYLLLARMLRLIRLLMHVPQYRAFVATFLTLIPSLMPYLGTIFCVLCIYCSLGVQIFGGIVNAGNPKLEATDLADNDYLIFNFNDYPNGMVTLFNLLVMGNWQVWMQSYKELTGTSWTYIYFISFYLITVLLLLNLVVAFVLEAFFAEMELETSADTGEEDDKETEGEKRRRRRIGTKTRSQRVDALLHHMLSSELCQAQPSDP 735
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0480 735 SUPERFAMILY EF-hand 319 410 IPR011992 -
Lele12g0480 735 SUPERFAMILY Voltage-gated potassium channels 431 676 - -
Lele12g0480 735 Gene3D - 310 394 - -
Lele12g0480 735 FunFam Two pore calcium channel protein 1 203 314 - -
Lele12g0480 735 Pfam Ion transport protein 432 677 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele12g0480 735 Pfam Ion transport protein 130 312 IPR005821 GO:0005216|GO:0006811|GO:0016020|GO:0055085
Lele12g0480 735 Gene3D - 203 309 - -
Lele12g0480 735 ProSiteProfiles EF-hand calcium-binding domain profile. 365 400 IPR002048 GO:0005509
Lele12g0480 735 FunFam Two pore calcium channel protein 1 556 714 - -
Lele12g0480 735 MobiDBLite consensus disorder prediction 687 711 - -
Lele12g0480 735 Coils Coil 307 327 - -
Lele12g0480 735 FunFam Two pore calcium channel protein 1 423 555 - -
Lele12g0480 735 PANTHER TWO PORE CALCIUM CHANNEL PROTEIN 1 2 731 IPR044581 GO:0005245
Lele12g0480 735 Gene3D - 555 717 - -
Lele12g0480 735 Gene3D - 423 554 IPR027359 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0480 Lele-ChrLele12 12774192 12789594 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0480 22 733 Ion Channels AT4G03560 70.126 0.0 1050