Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0473 ATGGCTATTGCCGGCGAACATGGTCCACTCAGGGACCGAGGTCAAATCCCCGTCATTTACCGACGAACACCATGTAAATATCGAGGCAAAAACATTGCCTTCCATGTGAATGAAGGTTCTACACCTTTTTGGCTTTCACTTTTGGTGGAATTTGAGGATGGAGAAGGAGATATAGGCTCTATGCATATTCAAGAAGCAGGGTCTATTGAGTGGCTAGAGATGAATCATCTGTGGGGTGCAAATTGGTGCATTATTGGGGGGCCATTGAGGGGACCATTTTCTGTGAAACTAAGCACATCCACTGGGAGATCTCTGTTTTCCAGAGATGTTATTCCGAGTAGTTGGTCTCCAAAAGCTACTTACACATCTCGTCTCAATTTCTACCCTTAG 390 0.4513 MAIAGEHGPLRDRGQIPVIYRRTPCKYRGKNIAFHVNEGSTPFWLSLLVEFEDGEGDIGSMHIQEAGSIEWLEMNHLWGANWCIIGGPLRGPFSVKLSTSTGRSLFSRDVIPSSWSPKATYTSRLNFYP 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0473 129 Pfam Expansin C-terminal domain 32 112 IPR007117 -
Lele12g0473 129 FunFam Beta-expansin 3 27 128 - -
Lele12g0473 129 PANTHER EXPANSIN-B3 1 127 - -
Lele12g0473 129 ProSiteProfiles Expansin, Cellulose-binding-like domain profile. 43 123 IPR007117 -
Lele12g0473 129 SUPERFAMILY PHL pollen allergen 30 123 IPR036749 -
Lele12g0473 129 PRINTS Expansin/Lol pI family signature 13 29 IPR007118 GO:0005576
Lele12g0473 129 PRINTS Expansin/Lol pI family signature 71 85 IPR007118 GO:0005576
Lele12g0473 129 PRINTS Expansin/Lol pI family signature 109 123 IPR007118 GO:0005576
Lele12g0473 129 Gene3D - 24 124 IPR036749 -
Lele12g0473 129 PRINTS Major pollen allergen Lol pI signature 34 49 IPR005795 GO:0005576|GO:0019953
Lele12g0473 129 PRINTS Major pollen allergen Lol pI signature 50 65 IPR005795 GO:0005576|GO:0019953
Lele12g0473 129 PRINTS Major pollen allergen Lol pI signature 99 116 IPR005795 GO:0005576|GO:0019953
Lele12g0473 129 PRINTS Major pollen allergen Lol pI signature 2 17 IPR005795 GO:0005576|GO:0019953
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0473 Lele-ChrLele12 12689289 12690893 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0473 1 78 Expansin Gene Family AT2G20750 61.538 5.41e-31 108
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0473 12 12689289 12690893 Lele12g0473 12 12689289 12690893 ECH
Lele09g0859 09 6891473 6893160 Lele12g0473 12 12689289 12690893 hybridization
Lele10g0792 10 6278566 6280741 Lele12g0473 12 12689289 12690893 hybridization