Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0469 ATGGCGACGGCGAGTAACAGTGGCAAATCCACCGGGGGTGGCGGTGGAGAAAGCCGTGATTGGGAGATTGAAAGAGATAAAGACGTAGATTTGAGCGGTGAGAGGCGACAATGGAAGCCAGTTTTTGAGGATGCTTCCATGTCGAACAGGCCTCTGAAGAAAATCCGAAGCCCACAACGTGACTCAAACCAAAATCAATCCTCTGTTCCCATTCTACCACATCCTCCTCCTTCTTCTTCCAGAATCGTCTTCCCTTTTGCCTTCGATGCTTCTCAACAGCCTCTGCAATTTCCCCATCACTCCACCAATTTACCTTCGTTTCCCCCACCGTTTAATCAAAATCAGCAGCAGATGATATCTTTCGGCTCCCAACAACAGCCGAACATGGGGTACCCTCAATTCTTCGCCCAAGACTCTGCAATCGCACACCAGCAACATCATCGGCATCAGCAGCAGCAACTTCTTCGGTATTGCAGAGACGCATTGAATCTGAGTCCAAGAGAAAGGATGATGATGATGATGAACAGCGTAGGGCCGGACGGGAGGCCAATGTATCGGCCACCTCCTCAGCCTATAAATACTACGAAGCTTTACAGAGGAGTGAGGCAGCGTCATTGGGGAAAATGGGTTGCTGAGATTCGGCTTCCTCGTAACAGGACTCGCCTCTGGCTCGGAACATTCGACACAGCTGAAGATGCTGCTTTAGCTTATGATCGCGAGGCCTTTAAGCTCAGAGGAGAGAATGCTCGGCTCAATTTCCCAGAGCTCTTCCGTAATAAGGATAAGCCATCCTCAACAACAGCCCCTGATTCATCTGCTTCTTCTCCGTCGAAGCAAACTGACTCTGCTCCAGAAGCTCCGATTGCGGAGGAGGAGAAGCCTCCGCAACCGCCACCGGAAGAGAGAACCGACAATGATTCTGGAATTGGGTCGAGTGACGCTACAATGAGCGACGAAGTTCAGGCTGCATCTAATACTGGAACAGGGGAGGGAACTTCGGCGGCGTCGCAAGAACTGGTTTGGGGAGAAATGGCGGCGTGGTTCAATGCAATTCCTGCGGGTTGGGGTCCGGGTAGCCCGGTGTGGGATGATTTGGATACGTTTCAGTCACAACTTCCATTTTTCAATCCCAATCACCAAGAATTCAATGATGCAGATCATCACAGACAGAAAGAAAATAATACAGTTCCATCAGATTCTTCCACTTCTTCTTGTCCCGTGAGACCCTTGTTCCGGAAAGGTCAAGATTGA 1251 0.502 MATASNSGKSTGGGGGESRDWEIERDKDVDLSGERRQWKPVFEDASMSNRPLKKIRSPQRDSNQNQSSVPILPHPPPSSSRIVFPFAFDASQQPLQFPHHSTNLPSFPPPFNQNQQQMISFGSQQQPNMGYPQFFAQDSAIAHQQHHRHQQQQLLRYCRDALNLSPRERMMMMMNSVGPDGRPMYRPPPQPINTTKLYRGVRQRHWGKWVAEIRLPRNRTRLWLGTFDTAEDAALAYDREAFKLRGENARLNFPELFRNKDKPSSTTAPDSSASSPSKQTDSAPEAPIAEEEKPPQPPPEERTDNDSGIGSSDATMSDEVQAASNTGTGEGTSAASQELVWGEMAAWFNAIPAGWGPGSPVWDDLDTFQSQLPFFNPNHQEFNDADHHRQKENNTVPSDSSTSSCPVRPLFRKGQD 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0469 416 SMART rav1_2 197 260 IPR001471 GO:0003700|GO:0006355
Lele12g0469 416 SUPERFAMILY DNA-binding domain 197 255 IPR016177 GO:0003677
Lele12g0469 416 MobiDBLite consensus disorder prediction 259 282 - -
Lele12g0469 416 CDD AP2 196 256 IPR001471 GO:0003700|GO:0006355
Lele12g0469 416 Gene3D AP2/ERF domain 197 255 IPR036955 GO:0003700|GO:0006355
Lele12g0469 416 PANTHER ETHYLENE-RESPONSIVE TRANSCRIPTION FACTOR ERF061 19 365 - -
Lele12g0469 416 MobiDBLite consensus disorder prediction 375 416 - -
Lele12g0469 416 PRINTS Ethylene responsive element binding protein signature 220 236 IPR001471 GO:0003700|GO:0006355
Lele12g0469 416 PRINTS Ethylene responsive element binding protein signature 198 209 IPR001471 GO:0003700|GO:0006355
Lele12g0469 416 Pfam AP2 domain 198 246 IPR001471 GO:0003700|GO:0006355
Lele12g0469 416 MobiDBLite consensus disorder prediction 18 41 - -
Lele12g0469 416 MobiDBLite consensus disorder prediction 1 80 - -
Lele12g0469 416 FunFam Ethylene-responsive transcription factor 2 196 255 - -
Lele12g0469 416 MobiDBLite consensus disorder prediction 255 314 - -
Lele12g0469 416 ProSiteProfiles AP2/ERF domain profile. 197 254 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0469 Lele-ChrLele12 12640099 12641349 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0469 1 364 AP2-EREBP Transcription Factor Family AT2G20880 41.287 6.90e-63 204
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Lele12g0469 AP2 3e-13 CL0081