Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0465 ATGTTCTCATGCAAATCGGTTTCTTTGTTTGTGCAGGGCCAGCAAATCGAAGGTAACCCGGAGGAATTTGATGAATTGATGGGACAGGTAGAAATATGGCACTACATGACCAGCTTCACCGATTCCGTCGCCCTCAAAGTCGCCGTCGAGCTTAGAATAGCCGACATTATCGACCACAATGGCCAACCCATGACCCTTCAAAAGATCGTCGACAACATCGCCGACGCTCCCAGCCCAGAAGTCACGTTCCTCTTTCGTATCATGCGAGTTCTTGTTCGCCGAAAGATCTTCTCCGCCCACCAAACTGACTCCGGCGAGACCCTTTACGGCTTAACCCGTGCCTCCAAATGGCTCCTTCGTGACACCAAAATGACCCTCTCACCCATGCTCCTCCTCGAGAACCACCCCATTCACTTGAACCCTGCTCACTACATTAGCCAATGTATCAGAGAAGGAACCAAAGACGGCACTGCTTTTTTCAAGTGCCATGGCCACGAGCAATTCGACCTCACCGGTTTGGACCCTGAATACAACAGGTTGTTCAATGAGGGCATGGTCTGCACCGCTAGGGTTACGTCCAAGGCTGTCATTTCCGGCTACAAGGATGGATTCTGCAAGATTCAATCCTTGGTCGACGTAGGTGGCGGCATCGGAGGATCACTCTCTGAGATCGTTCGAGCTTACCCACACATCAAAGGTATCAACTTTGATCTTCCCCACGTGGTCGCCACCGCACCAAACTACGACGGAATCACCCACGTCGGAGGAAACATGTTCGACTCCATCCCTAAAGCCGATGCCATCTACATGAAGTGGATTCTGCATGATTGGAGCGACCAGCACTGCGTTCAGATATTGAAGAACTGCAGAAAAGCGATACCGGAGAAGACAGGGAAGGTGATAATAGTGGATCATGTTCTGCAACCAGAAGGGAAAAATGGGCTGTTCGATGAAGTAGGGTATGCATTTGACATGATGCTTCTGGCACATAATGCTGGTGGAAGGGAAAGAACTGAGCAGGATTGGAAGAGGTTGTTTGAAGAAACTGGATTTCCGCGTTACAACATCATCAAGATCAAGGCTCTGCAATCCATCATTGAAGCCTTCCCAATCTAA 1116 0.4973 MFSCKSVSLFVQGQQIEGNPEEFDELMGQVEIWHYMTSFTDSVALKVAVELRIADIIDHNGQPMTLQKIVDNIADAPSPEVTFLFRIMRVLVRRKIFSAHQTDSGETLYGLTRASKWLLRDTKMTLSPMLLLENHPIHLNPAHYISQCIREGTKDGTAFFKCHGHEQFDLTGLDPEYNRLFNEGMVCTARVTSKAVISGYKDGFCKIQSLVDVGGGIGGSLSEIVRAYPHIKGINFDLPHVVATAPNYDGITHVGGNMFDSIPKADAIYMKWILHDWSDQHCVQILKNCRKAIPEKTGKVIIVDHVLQPEGKNGLFDEVGYAFDMMLLAHNAGGRERTEQDWKRLFEETGFPRYNIIKIKALQSIIEAFPI 371
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0465 371 CDD AdoMet_MTases 210 307 - -
Lele12g0465 371 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 33 370 IPR016461 GO:0008168
Lele12g0465 371 Pfam O-methyltransferase domain 144 351 IPR001077 GO:0008171
Lele12g0465 371 Gene3D Vaccinia Virus protein VP39 120 371 IPR029063 -
Lele12g0465 371 PIRSF O-mtase 12 371 IPR016461 GO:0008168
Lele12g0465 371 Gene3D - 16 118 IPR036388 -
Lele12g0465 371 Pfam Dimerisation domain 44 92 IPR012967 GO:0046983
Lele12g0465 371 PANTHER O-METHYLTRANSFERASE 32 353 IPR016461 GO:0008168
Lele12g0465 371 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 124 368 IPR029063 -
Lele12g0465 371 FunFam O-methyltransferase family protein 120 369 - -
Lele12g0465 371 SUPERFAMILY "Winged helix" DNA-binding domain 28 121 IPR036390 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0465 Lele-ChrLele12 12591527 12592741 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0465 43 371 Monolignol Biosynthesis Gene Families AT5G54160 38.323 8.04e-78 242