Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0461 ATGGAACCAGTTCTAAGTAATAACAATACTAGCGCTAGCTATGGCAGCAACAGCAACAACAACAACGACGACGATGGACACAATAATAATATCATTAGTTGGTTTGAAGATGTAACAGAGAAGGCAGGTTCTGTTCAGACCCAGATCTTATCCCAGATTCTGAATCAGAACTATGGCGTTGAATATCTCAACAAATGGTTGGGGAACTACAATATCCTCGACATGGATGCTTGTGCATTGGAATCTCTTTTCACTTCTGTTGTTCCCCTCGCTTCTCATGAAAATTTGGAGCCTTTTATCCAAAGGATTGCAGATGGAGACACTTCTCCCTTGCTCACTCGAGAACCCACCATTACCAATCTTTCCTTAAGTTCTGGAACCACAGAGGGAAGGCAAAAGCTTGTACCTTTCACCCGACACAGCGCCCAAACTACCCTACAAGTCTTCACTTTAGCCGCAGCCTACAGATCAAGGGTTTATCCCATAAGAGAAGGGGGTAGGATTCTTGAATTCATATACAGCAGCAATCAGTTTCAAACTAAAGGAGGCTTAAAGGTAGGAACAGCCACAACACACTATTATGCTAGCCAAGAGTTTAAAATCAAACAGGAGAAAACAAAATCATTCACTTGTAGCCCTGATGAGGTGATTTCAGGAGGAGACTATGAACAATCCACATATTGCCACCTTCTTCTTGGCCTCTACTTCTCGGATCAAGTTGAGTTCATCACTTCAGCTTTTGTCTATAGCATAGTGCAGGCTTTTCGTAGTTTAGAAGAATTTTGGAGAGATGTTTGCAATGACATTAAAAATGGAAGCTTGAGCTCAAGAATCACAGTACACAAAATGAGAAAAGCTGTTTTGAATCTGATTTCCCCAAACCCATCTCTAGCCTTTAAAGTAGAAGCTGCTTGCTTGGAATTAGAACGAGATCAGGTGAATTGGTTTGGTGTGATTCCTAAGCTTTGGCCAAATGTTAAGTACGTATATTCCATAATGACGGGGTCTATGCAACCTTACTTGAAAAAACTAAGACATTACGCAAATGAGTTGCCATTAGTAAGTGCTGATTATGGATCTACTGAGAGCTGGATTGGGGTTAATGTGGATCCTAGTTGGCCTCCCGAGAATGTAACTTACGCTGTCGTCCCTACTTTCTCGTACTTCGAGTTCATACCTCTTCATAGACAGATCAAGCAAGGTTTCAATAATTCAGTTGCTGATGATTTCATGGAGGATTTGCCTATTCCACTGTCCCAAGTTAAGGTTGGACAGGAGTATGAAATAGTTCTCACAACTTTCACTGGACTGTATAGGTGCAGGCTAGGGGACGTAGTGGAAGTTGCAGGATTTCACAATGGGACCCCAAAGTTGAATTTCATATGCAGAAGGAAGCTAATACTGACAATAAACATAGACAAGAACACAGAGAAAGATCTTCAGCTAGTGGTAGAGAGAGGATCCGATCTGCTGAACAAGGAAGGAGCAGCAGAGGTGGTGGACTTCACTAGCTATGCCGACGTATCGAAGCCACCGGGACACTACGTGATCTTCTGGGAGATCAAAGGCCAAGCAGATGACAAGTTGCTACACAAATGTTGCACCCAAATGGACTTGTCCTTCGTCGATCATGGCTACGTTGTGTCCAGAAAGACAAAAGCCATTGGCCCTCTTGAACTCAGAATCGTTCAGAGAGGCACTTTCAAGAGAATTCTTGACCATTTCGTTGCAAATGGGGCTGCTCTTGGCCAGTTCAAGACCCCTAGGTGCACCACTAACACTGGCCTCCTCAGTATCCTTTCTTCCTCCACCATTAGGACCTTTCGCAGCACTGCCTATGCTTAG 1845 0.4341 MEPVLSNNNTSASYGSNSNNNNDDDGHNNNIISWFEDVTEKAGSVQTQILSQILNQNYGVEYLNKWLGNYNILDMDACALESLFTSVVPLASHENLEPFIQRIADGDTSPLLTREPTITNLSLSSGTTEGRQKLVPFTRHSAQTTLQVFTLAAAYRSRVYPIREGGRILEFIYSSNQFQTKGGLKVGTATTHYYASQEFKIKQEKTKSFTCSPDEVISGGDYEQSTYCHLLLGLYFSDQVEFITSAFVYSIVQAFRSLEEFWRDVCNDIKNGSLSSRITVHKMRKAVLNLISPNPSLAFKVEAACLELERDQVNWFGVIPKLWPNVKYVYSIMTGSMQPYLKKLRHYANELPLVSADYGSTESWIGVNVDPSWPPENVTYAVVPTFSYFEFIPLHRQIKQGFNNSVADDFMEDLPIPLSQVKVGQEYEIVLTTFTGLYRCRLGDVVEVAGFHNGTPKLNFICRRKLILTINIDKNTEKDLQLVVERGSDLLNKEGAAEVVDFTSYADVSKPPGHYVIFWEIKGQADDKLLHKCCTQMDLSFVDHGYVVSRKTKAIGPLELRIVQRGTFKRILDHFVANGAALGQFKTPRCTTNTGLLSILSSSTIRTFRSTAYA 614
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0461 614 MobiDBLite consensus disorder prediction 1 28 - -
Lele12g0461 614 PANTHER GH3 DOMAIN-CONTAINING PROTEIN 29 613 IPR004993 -
Lele12g0461 614 Pfam GH3 auxin-responsive promoter 34 593 IPR004993 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0461 Lele-ChrLele12 12502284 12506883 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0461 35 611 EF-hand Containing Proteins AT1G23160 36.149 1.74e-122 372
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele31g1027 31 17256379 17262736 Lele12g0461 12 12502284 12506883 CCT
Lele32g0496 32 3101763 3105679 Lele12g0461 12 12502284 12506883 CCT
Lele12g0461 12 12502284 12506883 Lele12g0461 12 12502284 12506883 ECH
Lele09g0875 09 7039421 7041200 Lele12g0461 12 12502284 12506883 hybridization
Lele10g0803 10 6436091 6441603 Lele12g0461 12 12502284 12506883 hybridization