Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0442 ATGGGAAGAGCTCCTTGCTGTGACAAAAATGGACTCAAGAAGGGTCCATGGACGCCCGAGGAAGATCTAAAGCTTATCAACTACATCCAGACTCATGGAAAAGGCAATTGGCGAACCATCCCCAAGAAGGCTGCAGCAAGATTACCAGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACTCACATCAGGAAGAGATTGCTTCGAAATGGAATCGATCCTGTTACTCATGCCCCACGACTCTACCTTCTTGATATATCTTCCATGCTAAGATCAGCGCTGACCAACCAATTGCTTCTGAATCTGCAAAGTTTATTGGGAGCTCAAGCTTTGATGAACCCAGAACTGTTGAAGCTGGCCACCACTCTGTTAGCTCTCAAGAACAATGAGATCCCAGATATGGTTTCACAGAATCTACAACAAATCATGATGCAGGCCGGGAATATCAGTCAGATGCCAACGCAGAGTACCAATTTCCATGAAGCTCTCACAGTCAATATCACAAACATGTGCTGTGTAAGTCCGCTACAGAATTCATCACTTCCTTCATATTTGTCGGATGAGAATATTATTAATCCGCAACAAAACCAAGTTGATTTGCAAGGAATAAGAAACCCAACAACATTCGGGCAGAGTTTAATAAACAATGAAGATGTCCAAAACATGGGCTATGATTCAGTTCTGTCAACGACCTTGTCGAGCCCAACACCCATAAATTCATCGTCTTCGTATGTGAATAGCAGCGCGGAGGAGCAAAAGGATACCCATTGCAGCGATTTGTTCAAGTTCGAAATTCCAGAGAGTATCGACATCAGTGACTTCTTGTATATTAGTATATTTTGGTCTGCGACATTTTTCTTCTTCTTGTTTCTCGAATTTCGTTTGCCTGACGTCCATGTGCATTTTTTTTTTTCAGCTTGA 924 0.4232 MGRAPCCDKNGLKKGPWTPEEDLKLINYIQTHGKGNWRTIPKKAAARLPGRTDNEIKNYWNTHIRKRLLRNGIDPVTHAPRLYLLDISSMLRSALTNQLLLNLQSLLGAQALMNPELLKLATTLLALKNNEIPDMVSQNLQQIMMQAGNISQMPTQSTNFHEALTVNITNMCCVSPLQNSSLPSYLSDENIINPQQNQVDLQGIRNPTTFGQSLINNEDVQNMGYDSVLSTTLSSPTPINSSSSYVNSSAEEQKDTHCSDLFKFEIPESIDISDFLYISIFWSATFFFFLFLEFRLPDVHVHFFFSA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0442 307 Gene3D - 11 70 - -
Lele12g0442 307 Pfam Myb-like DNA-binding domain 14 63 IPR001005 -
Lele12g0442 307 SUPERFAMILY Homeodomain-like 8 74 IPR009057 -
Lele12g0442 307 CDD SANT 16 64 IPR001005 -
Lele12g0442 307 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 44 - -
Lele12g0442 307 SMART sant 13 66 IPR001005 -
Lele12g0442 307 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 68 IPR017930 -
Lele12g0442 307 ProSiteProfiles Myb-like domain profile. 9 64 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0442 Lele-ChrLele12 12282799 12284235 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0442 1 276 MYB Transcription Factor Family AT4G21440 33.884 1.61e-53 176
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele12g0442 Myb_DNA-binding 1.8e-15 CL0123