Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0439 ATGGACGCCCGAGGAAGATCTAAAGCTTATCAACTACATCCAGACTCATGGAAAAGGCAATTGGCGAACCATCCCCAAGAAGGCTGATGGTCGGCTATAGCAGCAAGATTACCAGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACTCACATCAGGAAGAGACTGCTTCGAAATGGAATCGATCCTGTTACTCATGCCCCACGACTCTACCTTCTTGATATATCTTCCATGCTAAGATCAGCGCTGACCAACCAATTGCTTCTGAATCTGCAAAGTTTATTGGGAGCTCAAGCTTTGATGAACCCAGAACTGTTGAAGCTTGCCACCACTCTGTTAGCTCTCAAGAATAATGAGATCCCAGATATGGTTTCACAGAATCTACAACAAATCATGATGCAGGCCGGGAATATCAGTCAGATGCCAACGCAGAGTACCAATTTGCATGAAGCTCTCACAGTCAATATCACAAACATGTGCTGTGTAAGTCCGCTACAGAATTCATCACTTCCTTCATATTTGGCTGATGAGAATATTATTAATCCGCAACAAAACCAAGTTGATTTGCAAGGAATAAGAAACCCAACAACATTCGGGCAGAGTTTAATAACCAATGAAGATGTCCAAAACATGGGCTATGATTCAGTTCTGTCAACGACCTTGTCGAGCCCAACACCCATAAATTCATCGTCTTCGTATGTGAATAGCAGCGCGGAGGAGCAAAAGGATACCCATTGCAGCGATTTGTTCAAGTTCGAAATTCCAGAGAGTATCGACATCAGTGACTTCTTGTAA 798 0.4298 MDARGRSKAYQLHPDSWKRQLANHPQEGXWSAIAARLPGRTDNEIKNYWNTHIRKRLLRNGIDPVTHAPRLYLLDISSMLRSALTNQLLLNLQSLLGAQALMNPELLKLATTLLALKNNEIPDMVSQNLQQIMMQAGNISQMPTQSTNLHEALTVNITNMCCVSPLQNSSLPSYLADENIINPQQNQVDLQGIRNPTTFGQSLITNEDVQNMGYDSVLSTTLSSPTPINSSSSYVNSSAEEQKDTHCSDLFKFEIPESIDISDFL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0439 265 ProSiteProfiles Myb-like domain profile. 19 53 IPR001005 -
Lele12g0439 265 CDD SANT 27 53 IPR001005 -
Lele12g0439 265 SUPERFAMILY Homeodomain-like 25 62 IPR009057 -
Lele12g0439 265 Gene3D - 9 69 - -
Lele12g0439 265 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 28 215 - -
Lele12g0439 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 27 57 IPR017930 -
Lele12g0439 265 Pfam Myb-like DNA-binding domain 25 52 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0439 Lele-ChrLele12 12186459 12187758 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0439 30 265 MYB Transcription Factor Family AT4G21440 35.273 3.12e-35 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele12g0439 Myb_DNA-binding 8e-07 CL0123