Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0436 ATGGACGCCCGAGGAAGATCTAAAGCTTATCAACTACATCCAGACTCATGGACAAGGCAATTGGTGAACCATCCCCAAGAATGCTGATGGTCGGCTATAGCAGCAAGATTACCAGGAAGAACAGACAATGAAATAAAGAACTACTGGAACACTCACATCAGGAAGAGACTGCTTAGAAATGGAATCGATCCTGTTACTCATGCCCCACGACTCTACCTTCTTGATATATCTTCCATGCTAAGATCAGCGCTGACCAACCAATTGCTTCTGAATCTGCAAAGTTTATTGGGAGCTCAAGCTTTGATGAACCCAGAACTGTTGAAGCTGGCCACCACTCTGTTAGCTCTCAAGAATAATGAGATCCCAGATATGGTTTCACAGAATCTACAACAAATCATGATGCAGGCCGGGAATATCAGTCAGATGCCAACTCATAGTACCAATTTGCAAGAAGCTCTCACAGTCAATATCACAAACATGTGCTGTGTAAGTCCGCTACAGAATTCATCACTTCCTTCATATTTGTCTGATGAGAATATTATTAATCCGCAACAAAACCAAGTTGATTTGCAAGGAATAAGAAACCCAACAACATTCGGGCAGAGTTTAATAAACAATGAAGATGTCCAAAACATGGGCTATGATTCAGTTCTGTCAACGACCTTGTCGAGCCCAACACCCATAAATTCATCGTCTTCGTATGTGAATAGCAGCGCGGAGGAGCAAAAGGATCCCCATTGCAGCGATTTGTTCAAGTTCGAAATTCCAGAGAGTCTCAACATCAGTGACTTCTTGTAA 798 0.4248 MDARGRSKAYQLHPDSWTRQLVNHPQECXWSAIAARLPGRTDNEIKNYWNTHIRKRLLRNGIDPVTHAPRLYLLDISSMLRSALTNQLLLNLQSLLGAQALMNPELLKLATTLLALKNNEIPDMVSQNLQQIMMQAGNISQMPTHSTNLQEALTVNITNMCCVSPLQNSSLPSYLSDENIINPQQNQVDLQGIRNPTTFGQSLINNEDVQNMGYDSVLSTTLSSPTPINSSSSYVNSSAEEQKDPHCSDLFKFEIPESLNISDFL 265
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0436 265 ProSiteProfiles Myb-like domain profile. 30 53 IPR001005 -
Lele12g0436 265 Gene3D - 11 69 - -
Lele12g0436 265 SUPERFAMILY Homeodomain-like 24 62 IPR009057 -
Lele12g0436 265 CDD SANT 16 53 IPR001005 -
Lele12g0436 265 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 30 57 IPR017930 -
Lele12g0436 265 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 30 210 - -
Lele12g0436 265 Pfam Myb-like DNA-binding domain 28 52 IPR001005 -
Lele12g0436 265 SMART sant 13 55 IPR001005 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0436 Lele-ChrLele12 12145513 12146815 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0436 30 265 MYB Transcription Factor Family AT4G21440 33.818 1.16e-34 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele12g0436 Myb_DNA-binding 1.5e-06 CL0123