Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0434 ATGGCCATTGACAATACGCATCCTGCCAATCTTGAGGGAAAATATTCTGCAATACTTGTCTGCTGGCTTCTTGGCAATGGCTGCCTTTTCTCGTGGAACAGTATGCTGACAATAGAAGATTACTACGTGTATTTGTTTCCGAATTACCACTCCTCTCGGGTCCTCACTCTTGTATACCAGCCATTTGCTGTTGGAACACTGTTAATACTGGCTTATAATGAGGCAAAAATCAATACTAGATTACGGAACCTATTTGGATATACTCTTTTCTTCATCAGTACCCTGTTGGTGTTAGTTTTGGATTTAGCAACATCTGGCAAAGGAGGAATTGGAACCTTTATCGGTATTTGTGCCATAAGCGGCGCTTTTGGAGTTGCAGATGCACATGTGCAAGGTGGGATGGTCGGAGACCTTTCTTATATGAAACCAGAGTTCATTCAGTCTTTTCTTGCCGGATTAGCTGCTTCAGGAGCATTAACCTCTACTTTGAGACTAATTACAAAAGCTGCATTTGAGAATTCTGGGGACGGTCTTCGCAAGGGAGCAATTTTGTTTTTTGCCATATCGACATTCTTTGAGCTTATCTGCGTCCTTCTCTACGCGTTTGTCTTTCCTAAACTACCGATTGTCAAGTACTACCGTTCAAAAGCGGCCTCTGAAGGATCGAAAACTGTTGCAGCTGACCTTGTTGCTGGTGGCATCCAGACTTCAACCATTGATAAAGACGAGGAGGACCCGAAACTACTGGAGCGCAAGGGAAACATGCAACTATTATATGAAAACCTTGATTATGCACTCGATATGTTTCTAATCTACGTGCTAACTCTATCCATTTTCCCTGGATTTTTGTCAGAAGATACTGGATCACACAGTTTGGGCACCTGGTATGCTCTTGTGCTGATTGCAATGTACAATGTGAGTGATTTGATTGGAAGATACATTCCACTCGCAAAATTCCTGAAGCTGGAATCTCGAAAGATGATCACGATCGCGATTCTGAGTCGCTTCTTACTGATTCCTGCCTTTTATTTCACTGCAAAGTATGGTGACCAGGGATGGATGATAATATTAACCTCCTTCTTGGGGCTATCCAATGGATACCTCACTGTCTGTGTTCTCACTGCTGCACCAAAAGGTTACAAGGGACCAGAGCAAAATGCCTTGGGAAATATATTGGTGCTGTTTCTTCTTGCAGGTATTTTTGCAGGAGTTACGCTTGATTGGTTGTGGTTGATAGGCAAAGGCTGGTGA 1251 0.4301 MAIDNTHPANLEGKYSAILVCWLLGNGCLFSWNSMLTIEDYYVYLFPNYHSSRVLTLVYQPFAVGTLLILAYNEAKINTRLRNLFGYTLFFISTLLVLVLDLATSGKGGIGTFIGICAISGAFGVADAHVQGGMVGDLSYMKPEFIQSFLAGLAASGALTSTLRLITKAAFENSGDGLRKGAILFFAISTFFELICVLLYAFVFPKLPIVKYYRSKAASEGSKTVAADLVAGGIQTSTIDKDEEDPKLLERKGNMQLLYENLDYALDMFLIYVLTLSIFPGFLSEDTGSHSLGTWYALVLIAMYNVSDLIGRYIPLAKFLKLESRKMITIAILSRFLLIPAFYFTAKYGDQGWMIILTSFLGLSNGYLTVCVLTAAPKGYKGPEQNALGNILVLFLLAGIFAGVTLDWLWLIGKGW 416
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0434 416 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 351 367 IPR002259 GO:0005337|GO:0016020|GO:1901642
Lele12g0434 416 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 123 145 IPR002259 GO:0005337|GO:0016020|GO:1901642
Lele12g0434 416 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 388 412 IPR002259 GO:0005337|GO:0016020|GO:1901642
Lele12g0434 416 PRINTS Delayed-early response protein/equilibrative nucleoside transporter signature 151 171 IPR002259 GO:0005337|GO:0016020|GO:1901642
Lele12g0434 416 PANTHER EQUILIBRATIVE NUCLEOSIDE TRANSPORTER 6 410 IPR002259 GO:0005337|GO:0016020|GO:1901642
Lele12g0434 416 Pfam Nucleoside transporter 124 410 IPR002259 GO:0005337|GO:0016020|GO:1901642
Lele12g0434 416 PIRSF ENT 5 414 IPR002259 GO:0005337|GO:0016020|GO:1901642
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0434 Lele-ChrLele12 12111382 12113790 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0434 4 414 Organic Solute Cotransporters AT4G05120 71.046 0.0 602
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele29g0493 29 2971317 2971631 Lele12g0434 12 12111382 12113790 CCT
Lele30g0916 30 12954338 12962734 Lele12g0434 12 12111382 12113790 CCT
Lele12g0434 12 12111382 12113790 Lele12g0434 12 12111382 12113790 ECH
Lele09g0891 09 7320297 7323683 Lele12g0434 12 12111382 12113790 hybridization
Lele10g0821 10 6646597 6649745 Lele12g0434 12 12111382 12113790 hybridization