Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0432 ATGGAGTTTGACCTAGAAAACCCCTTCTCTAACTCTGACTCTCTCTCTTCCCTCTTCCTCACTGAACCTGACCACATCCCTCCCCAACACTACTTTCTCACCCTTCAATCCTCTCATCTTCACCTCTCCCTCCGAACCCAACTCATTTCTCTCATCTCTCAGTTGCCATGTTCCTTCGATCCCCTTCTCTCCTACTTAGCTATCAACTATCTCGATCGCTTTCTCGCCACCCAACCCACACTGGAACAAAAGCCATGGACGCTCAAGCTTCTTGCAGTATCATGCTTGTCTCTTGCTGCAAAGATGATGAAAACAGAGTTTTCCGTCACCGATGTCCAGGGCTTTCTGAAACAGGGTGATGGTGGTGGTACCATTTTTGAAGCACAAACTGTAAAGAGAATGGAAGCTTTGATCTTGGGAGCTCTACAATGGCGAATGCGTTCTATCACTCCCTTCTCTTTTATTCCTTTCTTCATCACTCTGTTCATGCTCAAAGACCCACCATTGAGACAAGTTCTGAAAGATCGAGCTGCCCAGATTATATTCAAATCACAAAGAGAGATAAAGCTTTTGGAATTCAGGCCTTCCATAATTGCTGCTTCAGCCCTCTTATATGCTTCTCATGAGCTGTTTCCTTTTCAATATCCATGCTTTCTTGCAGCAATTTCAAATTGTCCATACGAAACAATGTTGCAGTGCTACGACGTTATACGAGACCTTGCAATGGAAGGGTACGAATCTGTGTTGGACATGGTTTCTAGTTCAGACACACCGGTTAATGTGTTGGACCATCATTTTCTGAGCTCAGAAAGTGAAAGAACCTACGGAAATCCCGCCGCCGTTGCCACCACCCTCCGGCAAGAGAAAGATCTCAAGAGAAGGAAAATTAACGATTACGGTGACAATCTAACGGTCCACATTTCTCAGGGTAAAGAGAAGGTTGATGGATCAGAGATATTGTTCGTGGACAAAATCACTGCACCATGGTCCTTGTCAGCGCAAGGGAAGAATGGCGAATTCACGGTATGA 1029 0.4519 MEFDLENPFSNSDSLSSLFLTEPDHIPPQHYFLTLQSSHLHLSLRTQLISLISQLPCSFDPLLSYLAINYLDRFLATQPTLEQKPWTLKLLAVSCLSLAAKMMKTEFSVTDVQGFLKQGDGGGTIFEAQTVKRMEALILGALQWRMRSITPFSFIPFFITLFMLKDPPLRQVLKDRAAQIIFKSQREIKLLEFRPSIIAASALLYASHELFPFQYPCFLAAISNCPYETMLQCYDVIRDLAMEGYESVLDMVSSSDTPVNVLDHHFLSSESERTYGNPAAVATTLRQEKDLKRRKINDYGDNLTVHISQGKEKVDGSEILFVDKITAPWSLSAQGKNGEFTV 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0432 342 CDD CYCLIN 57 139 IPR013763 -
Lele12g0432 342 FunFam D6-type cyclin 28 143 - -
Lele12g0432 342 Gene3D - 16 235 - -
Lele12g0432 342 PANTHER CYCLINS 27 239 IPR039361 -
Lele12g0432 342 SUPERFAMILY Cyclin-like 130 248 IPR036915 -
Lele12g0432 342 Pfam Cyclin, N-terminal domain 17 146 IPR006671 -
Lele12g0432 342 SUPERFAMILY Cyclin-like 12 146 IPR036915 -
Lele12g0432 342 Gene3D - 28 147 - -
Lele12g0432 342 SMART Cyclin_C_2 149 261 IPR004367 -
Lele12g0432 342 FunFam D6-type cyclin 144 235 - -
Lele12g0432 342 Pfam Cyclin, C-terminal domain 149 241 IPR004367 -
Lele12g0432 342 SMART cyclin_7 46 140 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0432 Lele-ChrLele12 12084633 12086550 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0432 1 287 Core Cell Cycle Gene Families AT4G03270 44.984 1.07e-74 231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Lele12g0432 12 12084633 12086550 Lele12g0432 12 12084633 12086550 ECH
Lele09g0893 09 7387463 7390961 Lele12g0432 12 12084633 12086550 hybridization