Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Lele12g0421 | ATGGGACAAATCATCAACCTCACATTGCTAGTGATGCTTCTCTTGTCTCTCTTGTCAATTGAAGCTTTAGCTAATAAGCAATCCTTGAACAGAGCTCGTCGTCGATATAATCCTAAAACCGTCGCTTACATAAATGCCTCTTGCCACACCACTTTGTACCCAAATCTATGTCTTCGCTGCTTATACAAATTTGCCAATTCAAATATTCAAAGCCCGCAACACTTGACTCATGTGGCTTTATCTGTGAGTCTCTCACGAGCACTATACACAAGAGATTACTTGCAGCAAGTGGCCAAACAATTCAAGGCACTCAACAATGGTAATAATAATGGTAGGGATTATCTAGTTCTACAAGATTGCTTGAAGCAGATCAATGATAGTGTGGACCAGCTAGGGCTTTCGATAAAAGAGCTTGCGCGGTTGAACAAGATCTCAAACACCTTGATCAACGATGCCGTGTTGTGGCACATAAGCAATGTTGAGACGTGGATGAGCACTGCCCTTACTGATGCGAGCACTTGTGTGGAAAACTTCCCAGGTCATAGGATGAGCAGAATGAAGGCTACAATAAGGGGTAAGGTCTTGAATGTTGCACAAGTTACTAGCAATGCACTTGCCTTATTTCACACATATGCGACCAAGTACCGAGAAGCAGCACAAGCCAAGAAACCCTGA | 675 | 0.4311 | MGQIINLTLLVMLLLSLLSIEALANKQSLNRARRRYNPKTVAYINASCHTTLYPNLCLRCLYKFANSNIQSPQHLTHVALSVSLSRALYTRDYLQQVAKQFKALNNGNNNGRDYLVLQDCLKQINDSVDQLGLSIKELARLNKISNTLINDAVLWHISNVETWMSTALTDASTCVENFPGHRMSRMKATIRGKVLNVAQVTSNALALFHTYATKYREAAQAKKP | 224 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Lele12g0421 | 224 | SMART | PMEI_2 | 39 | 207 | IPR006501 | GO:0004857 | |
| Lele12g0421 | 224 | FunFam | Pectinesterase inhibitor 3 | 39 | 212 | - | - | |
| Lele12g0421 | 224 | PANTHER | PECTINESTERASE INHIBITOR-LIKE | 9 | 207 | - | - | |
| Lele12g0421 | 224 | CDD | PMEI-like_3 | 46 | 213 | - | - | |
| Lele12g0421 | 224 | Gene3D | Invertase/pectin methylesterase inhibitor family protein | 40 | 211 | IPR035513 | - | |
| Lele12g0421 | 224 | SUPERFAMILY | Plant invertase/pectin methylesterase inhibitor | 43 | 210 | IPR035513 | - | |
| Lele12g0421 | 224 | Pfam | Plant invertase/pectin methylesterase inhibitor | 43 | 207 | IPR006501 | GO:0004857 | |
| Lele12g0421 | 224 | TIGRFAM | PME_inhib: pectinesterase inhibitor domain | 8 | 211 | IPR006501 | GO:0004857 |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Lele12g0421 | Lele-ChrLele12 | 11787361 | 11788035 | Dispersed/Tandem |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Lele12g0421 | 7 | 208 | Carbohydrate Esterase | AT5G53370 | 25.472 | 1.00e-13 | 67.8 |