Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0420 ATGGAAGGCATCAACCATCAACAAAGAAAGATGGCACAACTCATCAACCTCACATTTCTTGGGATGCTCCTCTTGTCTTTCTTCTCAACTGAGGCTACAGCAAAACAATCCTTAATCAGTTCTCGTCGTCGATATAATCCTCAAACCATTGCTTACATAAAAGCCTCTTGCCAAACCACTTTGTACCCAAATCTATGCCTTCGCTGCCTATATAAATTTTCCAATTCAAACATTCAAAGCCCCCAACTCTTGACTCATGTGGCTTTATCTGTGAGTCTCGCACGAGCACTATACACAAGAGATTACTTGCTGCAAGTGGCCAAACAATTCAAGGCACTCAACAATGGTAATAATGGTAGGGATTATCTAGTTCTGCAAGATTGCTTGAAGCAGATCAATGATAGTGTGGACCAGCTGGGGCTTTCAATAAAGGAGCTTACGCGGTTGAATAAGATCCCAAACACTTTGATCAACGATGCCGTGTTGTGGCACATAAGCAACGTTGAGACGTGGATGAGCACTGCCCTTACTGATGCAAGCACTTGTGTGGATTATTTCCCAGGTCATAGGATGAGCAGGATGAAGGCTACAATAAGGGGTAAGGTCTTGAATGTTGCACAAGTTACTAGCAACGCACTTGCCTTATTTCACAGATATGCAGCTAAGTACCGAGAAGCAGCACAAGCCAAGAAACCCTGA 699 0.4349 MEGINHQQRKMAQLINLTFLGMLLLSFFSTEATAKQSLISSRRRYNPQTIAYIKASCQTTLYPNLCLRCLYKFSNSNIQSPQLLTHVALSVSLARALYTRDYLLQVAKQFKALNNGNNGRDYLVLQDCLKQINDSVDQLGLSIKELTRLNKIPNTLINDAVLWHISNVETWMSTALTDASTCVDYFPGHRMSRMKATIRGKVLNVAQVTSNALALFHRYAAKYREAAQAKKP 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0420 232 Pfam Plant invertase/pectin methylesterase inhibitor 52 215 IPR006501 GO:0004857
Lele12g0420 232 PANTHER PECTINESTERASE INHIBITOR-LIKE 23 215 - -
Lele12g0420 232 FunFam Pectinesterase inhibitor 3 48 220 - -
Lele12g0420 232 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 52 218 IPR035513 -
Lele12g0420 232 CDD PMEI-like_3 55 221 - -
Lele12g0420 232 Gene3D Invertase/pectin methylesterase inhibitor family protein 49 219 IPR035513 -
Lele12g0420 232 SMART PMEI_2 48 215 IPR006501 GO:0004857
Lele12g0420 232 TIGRFAM PME_inhib: pectinesterase inhibitor domain 18 219 IPR006501 GO:0004857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0420 Lele-ChrLele12 11757022 11757720 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0420 33 216 Carbohydrate Esterase AT3G14310 24.731 1.64e-13 67.4