Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0402 ATGGAACCGACGTCTGAAGGTAGTAGTGGAGGCGGAGGCGGTGGCGGTGGCGGTGGGCTTTCCCAGTTCCGTTCAACTCCGGCCACGGGGTTAGAAGCGCTGCTCAAGGAGGAAGACAAAGAAGACACATTGGATACCGCCCAGGGCTTCACTCAGTTGCTCGCTGCAGGTACTGATACCTTGTCTAGAAATATGGCATCTTTCGATTCGCCGGCAGCTGATGGAGGAGGTTTCGATTCTGGGTCATCGTCAGGTGGATTTTGCCGGCAGAATAGTTCTCCGGCGAACTTGTTCGGGAATACAATGGTTGCCTCTGAAACAGGGTACTTCTCCAAGTATTGGGTTCAATACAATCATGACGTTAGCCCCCAAGATATTGATGTTTCTTCTATGGCTAATTTCAAACCAGTTAGACAGAATGTTGAGCATACTAGCAAAGCACCAGACATAGACATAGAGAAGATTTTGGAGGATTCAGTACCTTGGAGAGTTCGGGCAAAGCGTGGACATGCTACACATCCAAGGAGCATTGCTGAAAGGGTTCGTAGAACACGGATAAGTGATCGCATACGGAAGCTTCAAGAACTTTTGCCAAACATGGATAAACAAACAAATACTGCAGAAATGTTAGACGAGGCTGTAGCATATGTGAAGTCTCTGCAGAAGCAAATCGAGGAACTTATAGAGCACCGAAGAAAATGTAAATGCACAGTTCAAGAGTAA 723 0.473 MEPTSEGSSGGGGGGGGGGLSQFRSTPATGLEALLKEEDKEDTLDTAQGFTQLLAAGTDTLSRNMASFDSPAADGGGFDSGSSSGGFCRQNSSPANLFGNTMVASETGYFSKYWVQYNHDVSPQDIDVSSMANFKPVRQNVEHTSKAPDIDIEKILEDSVPWRVRAKRGHATHPRSIAERVRRTRISDRIRKLQELLPNMDKQTNTAEMLDEAVAYVKSLQKQIEELIEHRRKCKCTVQE 240
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0402 240 FunFam Transcription factor bHLH130 family 171 239 - -
Lele12g0402 240 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 169 237 IPR036638 GO:0046983
Lele12g0402 240 SMART finulus 176 226 IPR011598 GO:0046983
Lele12g0402 240 MobiDBLite consensus disorder prediction 66 86 - -
Lele12g0402 240 Coils Coil 210 237 - -
Lele12g0402 240 Gene3D - 167 240 IPR036638 GO:0046983
Lele12g0402 240 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 170 220 IPR011598 GO:0046983
Lele12g0402 240 MobiDBLite consensus disorder prediction 1 43 - -
Lele12g0402 240 Pfam Helix-loop-helix DNA-binding domain 175 221 IPR011598 GO:0046983
Lele12g0402 240 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 79 230 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0402 Lele-ChrLele12 10833618 10839437 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0402 49 240 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G09180 45.283 2.30e-53 171
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Lele12g0402 HLH 1.3e-09 No_clan