Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0390 ATGATTTCCGTTGAATCTCAGCAAAACCCAGACCTCTCGTCTCCTCCTTCTCCAAAACCTGCTTCAAATGATGCCAAATGTGCCGATTCTCCCCAAACTACCCATATCTTCAGGTCTAAATTACCAGACATACCTATTTCGAACCATCTTCCTCTTCACACTTACTGCTTCGAGAGTCTCTCTCAATTCGCTGATCGTCCCTGCCTCATCGTCGGTTCCACTGGGAAAATTTACTCCTATGCGGAAGTTCACCTGGAGTCGCGGAAGATCGCCGCCGGATTCTCCAAGCTTGGGGTCAAGAAAGGCGATGTGATTATGATACTGCTACAGAATTCTGCTGAATTTGTTTTGTCGTTCTTTGCTGCTTCAATGATCGGCGCTGTGGTAACAACGGCGAATCCGTTTTACACTGCTGACGAAATCTTCAAGCAGCTCCGCGTCGCGAAGGCGAAACTGATCATCACGCAATCGGCGTGCGTTGGCAAACTACGAGACCATGAGGCCGGCGCGGACATCGGAGAGCATCAGCTTAAGGTGATTACCGTCGATGATCCGCCGGAGAAGTGCATGCATTTCTCGGTGGTGTTGGAAGCCGATGAGAATGAGGTGCCGGAGATGGAGATCAGCCCGGATGATCCGGTAGCGCTGCCGTTTTCTTCAGGAACAACTGGGTTGCCGAAGGGCGTGATTCTGACGCACAAGAGTTTAATAACGAGCGTGGCGCAACAGGTCGACGGCGAGAATCCGAACCTGTACCTGAAACCAGAGGACGTGTTGCTGTGCGTGCTTCCTCTGTTTCACATATTCTCTCTGAACAGCGTGTTGTTGTGTGCTCTGAGGGCGGGAAGTGCGGTGTTGCTGATGCACAAGTTTGAGATTGGCGCGTTGCTGGAACTGACGCAGAGGCATAAGGTGTCGGTGGCTATGGTGGTGCCGCCGCTGGTGCTGGCGTTGGCGAAGAATCCGATGGTGGCGGACTTTGATCTGAGCTCGATACGGTTGGTGTTGTCTGGAGCGGCGCCGCTGGGGAAGGAGCTGGAGGACGCTCTAAGAAGCAGAGTGCCTCAGGCCGTTCTGGGTCAGGGATACGGAATGACGGAGGCAGGGCCAGTGTTGTCAATGTGTCTGGGTTTTGCCAAAGAAGCATTCCCAACAAAGTCAGGATCGTGTGGCACAGTCGTCAGAAACGCAGAGCTCAAAGTGGTTGACCCTGAAACTGGTCGCTCTCTTGCGTATAACCAACCTGGTGAGATTTGCATCCGAGGCCACCAAATCATGAAAGGATATCTGGATGATGAGAAGGCGACAGCAGCAACTATAGATGCAGGGGGATGGCTTCACACAGGGGATATTGGGTACATAGATGACGACGATGAGTTATTCATAGTAGACAGAGTTAAGGAGCTTATCAAATTCAAAGGCTTCCAGGTGCCACCAGCAGAACTTGAAGGCCTTCTTGTAAGTCACCCTTCCATTGCAGACGCAGCTGTCGTCCCGCAAAAGCATGATGTTGCCGGTGAAGTTCCCGTTGCCTTCATTGTAAGGTCAAATGGCTTTGATCTGACTGAAGAGGCTGTAAAGGAATACATAGCGAAAAGGGTAGTGTTTTACAAAAGATTACACAAAGTGTACTTCGTTCATGCAATTCCAAAGTCTCCAGCTGGGAAGATATTGAGAAAAGATCTGAGAGCAAAGCTAGAGAGCAACAACATCCAAACGACTTGA 1725 0.5072 MISVESQQNPDLSSPPSPKPASNDAKCADSPQTTHIFRSKLPDIPISNHLPLHTYCFESLSQFADRPCLIVGSTGKIYSYAEVHLESRKIAAGFSKLGVKKGDVIMILLQNSAEFVLSFFAASMIGAVVTTANPFYTADEIFKQLRVAKAKLIITQSACVGKLRDHEAGADIGEHQLKVITVDDPPEKCMHFSVVLEADENEVPEMEISPDDPVALPFSSGTTGLPKGVILTHKSLITSVAQQVDGENPNLYLKPEDVLLCVLPLFHIFSLNSVLLCALRAGSAVLLMHKFEIGALLELTQRHKVSVAMVVPPLVLALAKNPMVADFDLSSIRLVLSGAAPLGKELEDALRSRVPQAVLGQGYGMTEAGPVLSMCLGFAKEAFPTKSGSCGTVVRNAELKVVDPETGRSLAYNQPGEICIRGHQIMKGYLDDEKATAATIDAGGWLHTGDIGYIDDDDELFIVDRVKELIKFKGFQVPPAELEGLLVSHPSIADAAVVPQKHDVAGEVPVAFIVRSNGFDLTEEAVKEYIAKRVVFYKRLHKVYFVHAIPKSPAGKILRKDLRAKLESNNIQTT 574
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0390 574 MobiDBLite consensus disorder prediction 1 29 - -
Lele12g0390 574 ProSitePatterns Putative AMP-binding domain signature. 216 227 IPR020845 -
Lele12g0390 574 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 32 564 - -
Lele12g0390 574 CDD 4CL 46 562 - -
Lele12g0390 574 Pfam AMP-binding enzyme C-terminal domain 481 556 IPR025110 -
Lele12g0390 574 Pfam AMP-binding enzyme 59 472 IPR000873 -
Lele12g0390 574 Gene3D - 467 571 IPR045851 -
Lele12g0390 574 FunFam 4-coumarate--CoA ligase 2 468 569 - -
Lele12g0390 574 FunFam Long-chain-fatty-acid--CoA ligase FadD 38 467 - -
Lele12g0390 574 SUPERFAMILY Acetyl-CoA synthetase-like 40 568 - -
Lele12g0390 574 Gene3D - 27 466 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0390 Lele-ChrLele12 9685460 9695286 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0390 8 479 Monolignol Biosynthesis Gene Families AT1G65060 69.474 0.0 660