Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0387 ATGGGACGTTCGCCTTGTTGCGATAAAGCCCACACAAACAAAGGCGCTTGGACCAAAGAAGAAGACCAACGCCTGATTGATTATATTCGACTCCATGGCGAAGGCTCTTGGCGTTCTCTCCCTAAAGCTGCTGCCGAGTGGGACTTCAAGACCTCACCGGCGGCGGAAAACGATTTCTTCGTGAAGAAGCAGAAGCTGAAGCAGGAGCGTGATAGTTTCAATTGCATCCATTTCGGCAAGATTAAGGCGGTTGAGGAGTTGAACAACACTAGTAGTGGCACCACAACAGAGGAAGAAGAACCGCAATTCCTGGAGCGAGATTCTTCGCTTCATCGTGCTGGTGGTGAGCCCAATCTGGAGCTCTCGATTGGTCTTGTGCCGTTTCACTCCGAATCGGCTCGTACAGTATCAGGGGAACTAGGCCGAGTCAAAAATTGGGTTGGTCTTGTCGCCGGCAACGGTGGCTCAACCGGCGGCGTGTCCGAGTTGGCAATTCGATTTTTAGAGGTGGGCAAGTGTATAGAAACAAAGAACCGCCACAACGCAAATCGATTTAGGAATGGATTTCAAACACACTGA 579 0.506 MGRSPCCDKAHTNKGAWTKEEDQRLIDYIRLHGEGSWRSLPKAAAEWDFKTSPAAENDFFVKKQKLKQERDSFNCIHFGKIKAVEELNNTSSGTTTEEEEPQFLERDSSLHRAGGEPNLELSIGLVPFHSESARTVSGELGRVKNWVGLVAGNGGSTGGVSELAIRFLEVGKCIETKNRHNANRFRNGFQTH 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0387 192 Pfam Myb-like DNA-binding domain 14 41 IPR001005 -
Lele12g0387 192 ProSiteProfiles Myb-like domain profile. 9 42 IPR001005 -
Lele12g0387 192 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 39 IPR017930 -
Lele12g0387 192 PANTHER TRANSCRIPTION FACTOR MYB8-RELATED-RELATED 1 44 - -
Lele12g0387 192 Gene3D - 13 76 - -
Lele12g0387 192 CDD SANT 16 42 IPR001005 -
Lele12g0387 192 SUPERFAMILY Homeodomain-like 9 43 IPR009057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0387 Lele-ChrLele12 9121082 9122168 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0387 1 45 MYB Transcription Factor Family AT4G09460 86.667 2.09e-23 91.7
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Lele12g0387 Myb_DNA-binding 1.3e-07 CL0123