Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Lele12g0361 ATGGTGAGAACACCTTCGTACGACAATAGTGGACTTAAAAAAGGGACATGGACACCCGAGGAAGACAGGAAGCTAATTGCCTATGTTACTAGGTATGGCTGCTGGAATTGGCGCCAACTCCCCAGGTTTGCAGGACTGGCGAGGTGTGGAAAGAGTTGTAGACTGAGGTGGATGAATTATCTGAGACCCAACATCAAAAGAGGCAATTACACTCCTGAAGAAGAAGAACTTGTCATTAAACTTCACAAAGAACTGGGCAATAGATGGTCGGCGATTGCAGCTCATTTGCCGGGAAGAACTGATAACGAAATAAAGAACCACTGGCACACCACTCTTAAGAAGCGATCTCAATACAACTCGAGCAAACGCCATAGATCTAAAAAGTCAAAAGATGACACTTCTTCCACTAGCAAACCACACAGCAGTTCTTCTTCTTCTTCTTCTTCTTCTTCTCAGTCATATGATTCTTCCTCGTCCCAGATCAAAATCCTGGATTCTAGCACATTGTCTCCACAGTCATCCTCCACCAGCTGCATATCGTCTTCTGTAAATTCAAGTCTGCAAGATGATGACTTATCTTTTCTTGATGCTTTCACTGAGCCTGCAGAGACGACCCAGAATTTCTGGAGCCACTTAAATTTTGATGACATGTTTTACAATAATCCAACAGGAACAACAATGCCAGTACAAAATCCTCCTCAAACTCCATCTGTTATTCCTCATTCAACGTTTTTCGAGGATGATTTTGCTTTCTTGAATTCACTTTCCCCGAAACCATTTGAGAGTTTTCTGACGGAGACACAAATGAAAGATGTGTCGCCTTTCCATCCGACACAGTCACAAGCACCATTGGGAGCTGAATTAGAATATGTTTATCCACTTTATGATCTGGATCTCTGGAGTTAA 906 0.426 MVRTPSYDNSGLKKGTWTPEEDRKLIAYVTRYGCWNWRQLPRFAGLARCGKSCRLRWMNYLRPNIKRGNYTPEEEELVIKLHKELGNRWSAIAAHLPGRTDNEIKNHWHTTLKKRSQYNSSKRHRSKKSKDDTSSTSKPHSSSSSSSSSSSQSYDSSSSQIKILDSSTLSPQSSSTSCISSSVNSSLQDDDLSFLDAFTEPAETTQNFWSHLNFDDMFYNNPTGTTMPVQNPPQTPSVIPHSTFFEDDFAFLNSLSPKPFESFLTETQMKDVSPFHPTQSQAPLGAELEYVYPLYDLDLWS 301
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Lele12g0361 301 SUPERFAMILY Homeodomain-like 11 108 IPR009057 -
Lele12g0361 301 MobiDBLite consensus disorder prediction 136 182 - -
Lele12g0361 301 PANTHER MYB FAMILY TRANSCRIPTION FACTOR 1 196 - -
Lele12g0361 301 MobiDBLite consensus disorder prediction 104 182 - -
Lele12g0361 301 Gene3D - 6 67 - -
Lele12g0361 301 ProSiteProfiles Myb-like domain profile. 62 112 IPR001005 -
Lele12g0361 301 SMART sant 66 114 IPR001005 -
Lele12g0361 301 SMART sant 13 63 IPR001005 -
Lele12g0361 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 62 116 IPR017930 -
Lele12g0361 301 Pfam Myb-like DNA-binding domain 14 61 IPR001005 -
Lele12g0361 301 Pfam Myb-like DNA-binding domain 67 111 IPR001005 -
Lele12g0361 301 FunFam MYB-related transcription factor 13 66 - -
Lele12g0361 301 CDD SANT 16 61 IPR001005 -
Lele12g0361 301 ProSiteProfiles Myb-like domain profile. 9 61 IPR001005 -
Lele12g0361 301 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 9 61 IPR017930 -
Lele12g0361 301 CDD SANT 69 112 IPR001005 -
Lele12g0361 301 Gene3D - 68 144 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Lele12g0361 Lele-ChrLele12 5302024 5303227 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Lele12g0361 1 212 MYB Transcription Factor Family AT2G31180 46.226 2.86e-57 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB Lele12g0361 Myb_DNA-binding 1.9e-12 CL0123